Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MIR3197-201ENST00000582241 73 ntBASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 AC125634.1-201ENST00000438758 1403 ntBASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM43Q96BQ3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 NKAPP1-205ENST00000585790 367 ntBASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 FP475955.4-201ENST00000623131 1990 ntBASIC19.94■□□□□ 0.78
TRIM43Q96BQ3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 AC211486.1-202ENST00000416371 468 ntBASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 AC009947.1-201ENST00000444350 727 ntBASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 MTCL1P1-201ENST00000446207 792 ntBASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 AC211476.1-201ENST00000503899 468 ntBASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 MTDHP4-201ENST00000600287 670 ntBASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 AL596442.2-201ENST00000610240 980 ntBASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 AC107918.4-202ENST00000641623 219 ntBASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM43Q96BQ3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM43Q96BQ3 METTL21AP1-201ENST00000438852 635 ntBASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms