Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SHC3Q92529 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC3Q92529 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.67■□□□□ 0.74
SHC3Q92529 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.67■□□□□ 0.74
SHC3Q92529 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.67■□□□□ 0.74
SHC3Q92529 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.67■□□□□ 0.74
SHC3Q92529 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC3Q92529 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.67■□□□□ 0.74
SHC3Q92529 AC009065.1-201ENST00000564055 1225 ntBASIC19.67■□□□□ 0.74
SHC3Q92529 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.67■□□□□ 0.74
SHC3Q92529 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.67■□□□□ 0.74
SHC3Q92529 AC012306.2-201ENST00000609350 630 ntBASIC19.67■□□□□ 0.74
SHC3Q92529 AL138966.2-201ENST00000621997 464 ntBASIC19.67■□□□□ 0.74
SHC3Q92529 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SHC3Q92529 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SHC3Q92529 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC3Q92529 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.67■□□□□ 0.74
SHC3Q92529 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SHC3Q92529 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC3Q92529 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
SHC3Q92529 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHC3Q92529 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC3Q92529 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.67■□□□□ 0.74
SHC3Q92529 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SHC3Q92529 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SHC3Q92529 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.66■□□□□ 0.74
SHC3Q92529 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.66■□□□□ 0.74
SHC3Q92529 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.66■□□□□ 0.74
SHC3Q92529 PHGDH-209ENST00000641074 1780 ntBASIC19.66■□□□□ 0.74
SHC3Q92529 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.66■□□□□ 0.74
SHC3Q92529 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.66■□□□□ 0.74
SHC3Q92529 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.66■□□□□ 0.74
SHC3Q92529 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.66■□□□□ 0.74
SHC3Q92529 AC024243.1-201ENST00000609234 778 ntBASIC19.66■□□□□ 0.74
SHC3Q92529 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.66■□□□□ 0.74
SHC3Q92529 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SHC3Q92529 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
SHC3Q92529 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.66■□□□□ 0.74
SHC3Q92529 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 AIRN-201ENST00000601203 4374 ntBASIC19.66■□□□□ 0.74
SHC3Q92529 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SHC3Q92529 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SHC3Q92529 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHC3Q92529 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHC3Q92529 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SHC3Q92529 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
SHC3Q92529 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SHC3Q92529 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHC3Q92529 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHC3Q92529 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SHC3Q92529 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SHC3Q92529 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SHC3Q92529 SLC25A3P1-201ENST00000443844 931 ntBASIC19.65■□□□□ 0.74
SHC3Q92529 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.65■□□□□ 0.74
SHC3Q92529 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.65■□□□□ 0.74
SHC3Q92529 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.65■□□□□ 0.74
SHC3Q92529 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SHC3Q92529 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SHC3Q92529 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.65■□□□□ 0.74
SHC3Q92529 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SHC3Q92529 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.65■□□□□ 0.74
SHC3Q92529 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHC3Q92529 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.65■□□□□ 0.74
SHC3Q92529 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.65■□□□□ 0.74
SHC3Q92529 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SHC3Q92529 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SHC3Q92529 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SHC3Q92529 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
SHC3Q92529 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
SHC3Q92529 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
SHC3Q92529 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHC3Q92529 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHC3Q92529 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHC3Q92529 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.64■□□□□ 0.73
SHC3Q92529 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHC3Q92529 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.64■□□□□ 0.73
SHC3Q92529 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.64■□□□□ 0.73
SHC3Q92529 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.64■□□□□ 0.73
SHC3Q92529 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.64■□□□□ 0.73
SHC3Q92529 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHC3Q92529 AC073912.3-201ENST00000624414 853 ntBASIC19.64■□□□□ 0.73
SHC3Q92529 AC141257.4-201ENST00000634557 245 ntBASIC19.64■□□□□ 0.73
SHC3Q92529 AC136944.6-201ENST00000634818 245 ntBASIC19.64■□□□□ 0.73
SHC3Q92529 AC097493.4-201ENST00000641197 219 ntBASIC19.64■□□□□ 0.73
SHC3Q92529 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHC3Q92529 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SHC3Q92529 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms