Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 AL596275.1-201ENST00000423464 877 ntBASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCHCR1Q8TD31 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 AC116562.2-201ENST00000507042 360 ntBASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 AC011298.2-201ENST00000617989 482 ntBASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCHCR1Q8TD31 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 AL499627.1-201ENST00000569373 2188 ntBASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 B3GAT3P1-201ENST00000471720 806 ntBASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.23■□□□□ 0.67
CCHCR1Q8TD31 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 REXO1L10P-201ENST00000615707 1290 ntBASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 AC130371.2-201ENST00000619443 611 ntBASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 REXO1L12P-201ENST00000622156 912 ntBASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 AL357033.4-201ENST00000617703 1807 ntBASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCHCR1Q8TD31 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.21■□□□□ 0.67
CCHCR1Q8TD31 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCHCR1Q8TD31 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms