Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SYNE1Q8NF91 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE1Q8NF91 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE1Q8NF91 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
SYNE1Q8NF91 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNE1Q8NF91 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 NME1-207ENST00000480143 964 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 MIR3180-1-201ENST00000580374 94 ntBASIC5.69□□□□□ -1.5
SYNE1Q8NF91 MIR3180-3-201ENST00000584616 94 ntBASIC5.69□□□□□ -1.5
SYNE1Q8NF91 GXYLT1P4-201ENST00000613576 1192 ntBASIC5.69□□□□□ -1.5
SYNE1Q8NF91 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 LINC01311-201ENST00000565162 1445 ntBASIC5.69□□□□□ -1.5
SYNE1Q8NF91 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 AL645929.1-201ENST00000420084 975 ntBASIC5.69□□□□□ -1.5
SYNE1Q8NF91 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 AP005901.3-202ENST00000581653 237 ntBASIC5.69□□□□□ -1.5
SYNE1Q8NF91 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC5.69□□□□□ -1.5
SYNE1Q8NF91 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 RNA5SP419-201ENST00000515908 135 ntBASIC5.69□□□□□ -1.5
SYNE1Q8NF91 AC104692.2-201ENST00000603054 253 ntBASIC5.69□□□□□ -1.5
SYNE1Q8NF91 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 AR-207ENST00000612010 3896 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 SLC25A1P1-201ENST00000528351 927 ntBASIC5.69□□□□□ -1.5
SYNE1Q8NF91 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 AC036111.1-201ENST00000533973 1582 ntBASIC5.69□□□□□ -1.5
SYNE1Q8NF91 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 STARP1-201ENST00000397973 869 ntBASIC5.69□□□□□ -1.5
SYNE1Q8NF91 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 IFNL4P1-201ENST00000607083 540 ntBASIC5.69□□□□□ -1.5
SYNE1Q8NF91 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SYNE1Q8NF91 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms