Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 AL590627.1-203ENST00000421194 1026 ntBASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 PMS2P1-201ENST00000431037 1228 ntBASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 MINOS1P3-201ENST00000457048 203 ntBASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPOQ8N3V7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 AC093484.2-201ENST00000580996 2166 ntBASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 AF238378.1-201ENST00000526806 358 ntBASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 AP001005.1-201ENST00000571755 1248 ntBASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNPOQ8N3V7 AC098818.2-201ENST00000564925 2320 ntBASIC18.71■□□□□ 0.58
SYNPOQ8N3V7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 AP000593.1-201ENST00000393668 712 ntBASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNPOQ8N3V7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 NUS1P2-201ENST00000417358 873 ntBASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 AL773604.1-201ENST00000617417 272 ntBASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.69■□□□□ 0.58
SYNPOQ8N3V7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms