Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01561Q8N1V8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 KRASP1-201ENST00000407852 552 ntBASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 AC110285.5-201ENST00000611501 352 ntBASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01561Q8N1V8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC01561Q8N1V8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
LINC01561Q8N1V8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC12.4□□□□□ -0.43
LINC01561Q8N1V8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC01561Q8N1V8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
LINC01561Q8N1V8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 AC026366.1-201ENST00000488803 879 ntBASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 AP002982.1-201ENST00000492365 877 ntBASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 AL031985.4-201ENST00000642138 673 ntBASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 HTR7P1-202ENST00000624664 4411 ntBASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 AC034236.2-201ENST00000606662 1610 ntBASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 AC134043.2-201ENST00000624206 2238 ntBASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01561Q8N1V8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms