Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 TOB2P1-201ENST00000469761 992 ntBASIC18.76■□□□□ 0.59
CHPFQ8IZ52 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 AC009065.1-201ENST00000564055 1225 ntBASIC18.76■□□□□ 0.59
CHPFQ8IZ52 AC090616.6-201ENST00000582640 721 ntBASIC18.76■□□□□ 0.59
CHPFQ8IZ52 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 IGHV3-41-201ENST00000613121 348 ntBASIC18.76■□□□□ 0.59
CHPFQ8IZ52 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHPFQ8IZ52 Z98044.1-201ENST00000632503 1764 ntBASIC18.76■□□□□ 0.59
CHPFQ8IZ52 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 AC004870.1-201ENST00000315132 882 ntBASIC18.75■□□□□ 0.59
CHPFQ8IZ52 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CHPFQ8IZ52 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 AL357033.4-201ENST00000617703 1807 ntBASIC18.74■□□□□ 0.59
CHPFQ8IZ52 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 AL845331.1-201ENST00000424978 1190 ntBASIC18.74■□□□□ 0.59
CHPFQ8IZ52 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 AL390719.2-201ENST00000606993 987 ntBASIC18.74■□□□□ 0.59
CHPFQ8IZ52 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHPFQ8IZ52 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHPFQ8IZ52 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHPFQ8IZ52 HEIH-201ENST00000623091 1652 ntBASIC18.73■□□□□ 0.59
CHPFQ8IZ52 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHPFQ8IZ52 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.73■□□□□ 0.59
CHPFQ8IZ52 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.73■□□□□ 0.59
CHPFQ8IZ52 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHPFQ8IZ52 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHPFQ8IZ52 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms