Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SMC5Q8IY18 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.25
SMC5Q8IY18 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SMC5Q8IY18 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.83■■□□□ 1.25
SMC5Q8IY18 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC22.83■■□□□ 1.25
SMC5Q8IY18 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SMC5Q8IY18 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
SMC5Q8IY18 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.83■■□□□ 1.25
SMC5Q8IY18 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SMC5Q8IY18 MIR3180-4-201ENST00000582223 153 ntBASIC22.83■■□□□ 1.25
SMC5Q8IY18 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SMC5Q8IY18 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
SMC5Q8IY18 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC22.83■■□□□ 1.24
SMC5Q8IY18 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
SMC5Q8IY18 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
SMC5Q8IY18 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC22.83■■□□□ 1.24
SMC5Q8IY18 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
SMC5Q8IY18 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
SMC5Q8IY18 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC22.82■■□□□ 1.24
SMC5Q8IY18 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMC5Q8IY18 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
SMC5Q8IY18 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMC5Q8IY18 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMC5Q8IY18 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMC5Q8IY18 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SMC5Q8IY18 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.82■■□□□ 1.24
SMC5Q8IY18 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SMC5Q8IY18 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.82■■□□□ 1.24
SMC5Q8IY18 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC22.82■■□□□ 1.24
SMC5Q8IY18 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC22.82■■□□□ 1.24
SMC5Q8IY18 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMC5Q8IY18 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMC5Q8IY18 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.82■■□□□ 1.24
SMC5Q8IY18 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SMC5Q8IY18 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SMC5Q8IY18 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC22.82■■□□□ 1.24
SMC5Q8IY18 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.82■■□□□ 1.24
SMC5Q8IY18 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMC5Q8IY18 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC22.81■■□□□ 1.24
SMC5Q8IY18 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.81■■□□□ 1.24
SMC5Q8IY18 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
SMC5Q8IY18 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SMC5Q8IY18 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SMC5Q8IY18 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.81■■□□□ 1.24
SMC5Q8IY18 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.81■■□□□ 1.24
SMC5Q8IY18 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMC5Q8IY18 AC112497.1-201ENST00000624824 639 ntBASIC22.81■■□□□ 1.24
SMC5Q8IY18 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SMC5Q8IY18 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMC5Q8IY18 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.81■■□□□ 1.24
SMC5Q8IY18 AC093010.1-201ENST00000473625 1624 ntBASIC22.81■■□□□ 1.24
SMC5Q8IY18 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMC5Q8IY18 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
SMC5Q8IY18 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SMC5Q8IY18 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMC5Q8IY18 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMC5Q8IY18 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC22.81■■□□□ 1.24
SMC5Q8IY18 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.81■■□□□ 1.24
SMC5Q8IY18 AL024508.2-201ENST00000607749 1894 ntBASIC22.81■■□□□ 1.24
SMC5Q8IY18 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMC5Q8IY18 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMC5Q8IY18 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
SMC5Q8IY18 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SMC5Q8IY18 SP100-208ENST00000427101 1922 ntTSL 2 BASIC22.8■■□□□ 1.24
SMC5Q8IY18 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SMC5Q8IY18 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SMC5Q8IY18 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
SMC5Q8IY18 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SMC5Q8IY18 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SMC5Q8IY18 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
SMC5Q8IY18 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
SMC5Q8IY18 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.8■■□□□ 1.24
SMC5Q8IY18 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
SMC5Q8IY18 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SMC5Q8IY18 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
SMC5Q8IY18 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.8■■□□□ 1.24
SMC5Q8IY18 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SMC5Q8IY18 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.8■■□□□ 1.24
SMC5Q8IY18 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
SMC5Q8IY18 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC22.8■■□□□ 1.24
SMC5Q8IY18 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SMC5Q8IY18 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SMC5Q8IY18 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SMC5Q8IY18 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.8■■□□□ 1.24
SMC5Q8IY18 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC22.8■■□□□ 1.24
SMC5Q8IY18 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SMC5Q8IY18 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC22.8■■□□□ 1.24
SMC5Q8IY18 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SMC5Q8IY18 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
SMC5Q8IY18 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC22.79■■□□□ 1.24
SMC5Q8IY18 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
SMC5Q8IY18 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SMC5Q8IY18 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
SMC5Q8IY18 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC22.79■■□□□ 1.24
SMC5Q8IY18 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SMC5Q8IY18 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SMC5Q8IY18 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SMC5Q8IY18 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
SMC5Q8IY18 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SMC5Q8IY18 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms