Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 KRT17P2-201ENST00000300992 1314 ntBASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 BX088651.1-201ENST00000540551 451 ntBASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 C2orf69P3-201ENST00000565542 1120 ntBASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 AC116562.4-202ENST00000641738 218 ntBASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL3Q8IVW4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 AC092338.2-201ENST00000568827 1415 ntBASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 HOXB1-202ENST00000577092 1414 ntBASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 KRT18P23-201ENST00000435622 1283 ntBASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 WWOX-216ENST00000569818 525 ntBASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 CR769767.2-201ENST00000622735 460 ntBASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 ESPNP-201ENST00000270691 2015 ntBASIC18.95■□□□□ 0.62
CDKL3Q8IVW4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 GMCL1P1-201ENST00000463439 1581 ntBASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 KRT8P7-201ENST00000533003 1432 ntBASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 AL355075.4-201ENST00000554988 638 ntBASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.94■□□□□ 0.62
CDKL3Q8IVW4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms