Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM1Q86UE6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 AC069152.1-201ENST00000438030 544 ntBASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 UNC93B5-201ENST00000530315 699 ntBASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 AC133041.1-202ENST00000642053 222 ntBASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRTM1Q86UE6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 AL096828.2-201ENST00000567259 1965 ntBASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 AC004980.1-204ENST00000429707 299 ntBASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LRRTM1Q86UE6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
LRRTM1Q86UE6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRTM1Q86UE6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRRTM1Q86UE6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRTM1Q86UE6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
LRRTM1Q86UE6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRTM1Q86UE6 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.02■□□□□ 0.15
LRRTM1Q86UE6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRTM1Q86UE6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRTM1Q86UE6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.02■□□□□ 0.15
LRRTM1Q86UE6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 AC091390.4-202ENST00000476426 537 ntBASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 AC131212.4-201ENST00000623606 975 ntBASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM1Q86UE6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms