Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAI1Q7Z5J4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAI1Q7Z5J4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAI1Q7Z5J4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RAI1Q7Z5J4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.71■□□□□ 0.1
RAI1Q7Z5J4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.71■□□□□ 0.1
RAI1Q7Z5J4 AL357033.4-201ENST00000617703 1807 ntBASIC15.71■□□□□ 0.1
RAI1Q7Z5J4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 AL353801.3-201ENST00000609898 542 ntBASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 AP000974.1-201ENST00000623909 2387 ntBASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 AC113404.2-201ENST00000507884 177 ntBASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 AF238378.1-201ENST00000526806 358 ntBASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 AC009065.1-201ENST00000564055 1225 ntBASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAI1Q7Z5J4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 GUSBP12-201ENST00000513727 720 ntBASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 AC091304.2-201ENST00000564639 760 ntBASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAI1Q7Z5J4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 NUS1P2-201ENST00000417358 873 ntBASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 RN7SL606P-201ENST00000472779 293 ntBASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 AC005332.3-201ENST00000589904 676 ntBASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 CROCCP3-202ENST00000420820 1947 ntBASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 AL353692.3-201ENST00000407031 1396 ntBASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 AL773604.1-201ENST00000617417 272 ntBASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.68■□□□□ 0.1
RAI1Q7Z5J4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms