Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 AC073508.3-201ENST00000619697 1419 ntBASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 AC092865.7-201ENST00000641832 219 ntBASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.87■□□□□ 0.13
COLCA1Q6ZS62 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 AL031432.5-201ENST00000641059 760 ntBASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.86■□□□□ 0.13
COLCA1Q6ZS62 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 TERF1P1-201ENST00000311003 1181 ntBASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 AC211429.1-201ENST00000415277 523 ntBASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 LIN28AP1-201ENST00000429574 405 ntBASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.85■□□□□ 0.13
COLCA1Q6ZS62 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms