Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 AC092183.1-201ENST00000469884 875 ntBASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 AC009533.2-201ENST00000543664 586 ntBASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 AC005336.2-201ENST00000593183 939 ntBASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 AC125437.2-201ENST00000625180 2167 ntBASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LYSMD4Q5XG99 MTMR9LP-203ENST00000426597 1545 ntBASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 AC116407.3-201ENST00000623905 1129 ntBASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.04■□□□□ 0.48
LYSMD4Q5XG99 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 AC009102.3-201ENST00000623118 1491 ntBASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 HNRNPDP1-201ENST00000439535 754 ntBASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 AP001269.4-201ENST00000609611 512 ntBASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.03■□□□□ 0.48
LYSMD4Q5XG99 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD4Q5XG99 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD4Q5XG99 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD4Q5XG99 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.02■□□□□ 0.48
LYSMD4Q5XG99 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LYSMD4Q5XG99 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.02■□□□□ 0.48
LYSMD4Q5XG99 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LYSMD4Q5XG99 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms