Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.83■□□□□ 0.44
RSPO4Q2I0M5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 AC005034.1-201ENST00000426657 489 ntBASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 RCC2P3-201ENST00000418112 1537 ntBASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.82■□□□□ 0.44
RSPO4Q2I0M5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 AP005212.1-201ENST00000581547 1997 ntBASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 AC112907.3-201ENST00000577781 2400 ntBASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 AC112777.1-201ENST00000540175 1423 ntBASIC17.81■□□□□ 0.44
RSPO4Q2I0M5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 AC190387.1-201ENST00000551683 408 ntBASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.8■□□□□ 0.44
RSPO4Q2I0M5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 AL162377.1-201ENST00000618844 1793 ntBASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO4Q2I0M5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms