Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5Q00535 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDK5Q00535 AC026271.3-201ENST00000571884 352 ntBASIC16.66■□□□□ 0.26
CDK5Q00535 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.66■□□□□ 0.26
CDK5Q00535 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK5Q00535 AC008622.2-201ENST00000617006 1229 ntBASIC16.66■□□□□ 0.26
CDK5Q00535 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5Q00535 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5Q00535 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5Q00535 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK5Q00535 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5Q00535 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5Q00535 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5Q00535 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CDK5Q00535 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK5Q00535 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK5Q00535 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDK5Q00535 AL645608.8-201ENST00000606034 2086 ntBASIC16.65■□□□□ 0.26
CDK5Q00535 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 KRT16P1-201ENST00000399124 1418 ntBASIC16.65■□□□□ 0.26
CDK5Q00535 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.65■□□□□ 0.26
CDK5Q00535 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDK5Q00535 RNA5SP413-201ENST00000516373 109 ntBASIC16.65■□□□□ 0.26
CDK5Q00535 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.65■□□□□ 0.26
CDK5Q00535 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CDK5Q00535 RN7SL471P-201ENST00000580476 299 ntBASIC16.65■□□□□ 0.26
CDK5Q00535 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDK5Q00535 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 AL031985.4-201ENST00000642138 673 ntBASIC16.65■□□□□ 0.26
CDK5Q00535 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK5Q00535 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDK5Q00535 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDK5Q00535 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
CDK5Q00535 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDK5Q00535 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5Q00535 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDK5Q00535 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK5Q00535 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDK5Q00535 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5Q00535 KRT8P50-201ENST00000562022 1438 ntBASIC16.64■□□□□ 0.25
CDK5Q00535 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5Q00535 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5Q00535 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5Q00535 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5Q00535 FAM207BP-201ENST00000447172 505 ntBASIC16.64■□□□□ 0.25
CDK5Q00535 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK5Q00535 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK5Q00535 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.64■□□□□ 0.25
CDK5Q00535 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDK5Q00535 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5Q00535 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5Q00535 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDK5Q00535 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5Q00535 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5Q00535 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK5Q00535 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5Q00535 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDK5Q00535 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.64■□□□□ 0.25
CDK5Q00535 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDK5Q00535 AC006116.8-202ENST00000587620 1550 ntBASIC16.64■□□□□ 0.25
CDK5Q00535 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5Q00535 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.63■□□□□ 0.25
CDK5Q00535 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.63■□□□□ 0.25
CDK5Q00535 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.63■□□□□ 0.25
CDK5Q00535 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.63■□□□□ 0.25
CDK5Q00535 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5Q00535 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5Q00535 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5Q00535 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5Q00535 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5Q00535 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5Q00535 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5Q00535 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CDK5Q00535 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5Q00535 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5Q00535 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5Q00535 AL355802.2-201ENST00000402069 882 ntBASIC16.63■□□□□ 0.25
CDK5Q00535 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5Q00535 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5Q00535 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
CDK5Q00535 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDK5Q00535 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.63■□□□□ 0.25
CDK5Q00535 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.63■□□□□ 0.25
CDK5Q00535 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.63■□□□□ 0.25
CDK5Q00535 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms