Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.34■■□□□ 1.01
HTRA3P83110 AL513210.1-201ENST00000629608 234 ntBASIC21.34■■□□□ 1.01
HTRA3P83110 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.34■■□□□ 1.01
HTRA3P83110 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 AC009237.14-201ENST00000609975 1594 ntBASIC21.34■■□□□ 1.01
HTRA3P83110 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTRA3P83110 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HTRA3P83110 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
HTRA3P83110 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
HTRA3P83110 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTRA3P83110 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HTRA3P83110 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
HTRA3P83110 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.33■■□□□ 1.01
HTRA3P83110 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTRA3P83110 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.33■■□□□ 1.01
HTRA3P83110 AC233723.2-201ENST00000623798 2106 ntBASIC21.33■■□□□ 1.01
HTRA3P83110 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HTRA3P83110 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTRA3P83110 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
HTRA3P83110 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HTRA3P83110 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
HTRA3P83110 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
HTRA3P83110 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HTRA3P83110 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HTRA3P83110 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.32■■□□□ 1
HTRA3P83110 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.32■■□□□ 1
HTRA3P83110 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.32■■□□□ 1
HTRA3P83110 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.32■■□□□ 1
HTRA3P83110 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.32■■□□□ 1
HTRA3P83110 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.32■■□□□ 1
HTRA3P83110 VN2R19P-201ENST00000442399 1052 ntBASIC21.32■■□□□ 1
HTRA3P83110 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.32■■□□□ 1
HTRA3P83110 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.32■■□□□ 1
HTRA3P83110 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HTRA3P83110 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.32■■□□□ 1
HTRA3P83110 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.32■■□□□ 1
HTRA3P83110 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.32■■□□□ 1
HTRA3P83110 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
HTRA3P83110 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HTRA3P83110 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
HTRA3P83110 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.31■■□□□ 1
HTRA3P83110 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.31■■□□□ 1
HTRA3P83110 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.31■■□□□ 1
HTRA3P83110 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
HTRA3P83110 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.31■■□□□ 1
HTRA3P83110 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.31■■□□□ 1
HTRA3P83110 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.31■■□□□ 1
HTRA3P83110 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.31■■□□□ 1
HTRA3P83110 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.31■■□□□ 1
HTRA3P83110 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.31■■□□□ 1
HTRA3P83110 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.31■■□□□ 1
HTRA3P83110 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.31■■□□□ 1
HTRA3P83110 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.31■■□□□ 1
HTRA3P83110 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
HTRA3P83110 AC006557.2-201ENST00000592985 1240 ntBASIC21.31■■□□□ 1
HTRA3P83110 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.31■■□□□ 1
HTRA3P83110 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
HTRA3P83110 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.31■■□□□ 1
HTRA3P83110 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.31■■□□□ 1
HTRA3P83110 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.31■■□□□ 1
HTRA3P83110 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.31■■□□□ 1
HTRA3P83110 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.31■■□□□ 1
HTRA3P83110 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HTRA3P83110 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.31■■□□□ 1
HTRA3P83110 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
HTRA3P83110 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
HTRA3P83110 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
HTRA3P83110 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.3■■□□□ 1
HTRA3P83110 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HTRA3P83110 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
HTRA3P83110 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.3■■□□□ 1
HTRA3P83110 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HTRA3P83110 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HTRA3P83110 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.3■■□□□ 1
HTRA3P83110 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.3■■□□□ 1
HTRA3P83110 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
HTRA3P83110 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HTRA3P83110 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.3■■□□□ 1
HTRA3P83110 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.3■■□□□ 1
HTRA3P83110 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.3■■□□□ 1
HTRA3P83110 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.3■■□□□ 1
HTRA3P83110 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HTRA3P83110 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HTRA3P83110 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HTRA3P83110 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.3■■□□□ 1
HTRA3P83110 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.3■■□□□ 1
HTRA3P83110 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
HTRA3P83110 AL357033.4-201ENST00000617703 1807 ntBASIC21.29■■□□□ 1
HTRA3P83110 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HTRA3P83110 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HTRA3P83110 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
HTRA3P83110 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
HTRA3P83110 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HTRA3P83110 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.29■■□□□ 1
HTRA3P83110 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
HTRA3P83110 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
HTRA3P83110 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms