Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RPL39P62891 AL121829.2-201ENST00000620908 328 ntBASIC13.06□□□□□ -0.32
RPL39P62891 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL39P62891 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RPL39P62891 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RPL39P62891 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL39P62891 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RPL39P62891 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
RPL39P62891 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL39P62891 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL39P62891 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL39P62891 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RPL39P62891 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
RPL39P62891 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.06□□□□□ -0.32
RPL39P62891 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC13.06□□□□□ -0.32
RPL39P62891 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPL39P62891 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
RPL39P62891 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RPL39P62891 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
RPL39P62891 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RPL39P62891 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RPL39P62891 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.05□□□□□ -0.32
RPL39P62891 AC084018.2-201ENST00000613093 2607 ntBASIC13.05□□□□□ -0.32
RPL39P62891 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
RPL39P62891 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 AL357033.4-201ENST00000617703 1807 ntBASIC13.05□□□□□ -0.32
RPL39P62891 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.05□□□□□ -0.32
RPL39P62891 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.05□□□□□ -0.32
RPL39P62891 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RPL39P62891 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.05□□□□□ -0.32
RPL39P62891 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.05□□□□□ -0.32
RPL39P62891 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
RPL39P62891 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.05□□□□□ -0.32
RPL39P62891 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.05□□□□□ -0.32
RPL39P62891 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.05□□□□□ -0.32
RPL39P62891 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.05□□□□□ -0.32
RPL39P62891 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.05□□□□□ -0.32
RPL39P62891 AL050303.2-201ENST00000619798 666 ntBASIC13.05□□□□□ -0.32
RPL39P62891 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.05□□□□□ -0.32
RPL39P62891 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
RPL39P62891 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.05□□□□□ -0.32
RPL39P62891 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.05□□□□□ -0.32
RPL39P62891 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.05□□□□□ -0.32
RPL39P62891 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPL39P62891 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
RPL39P62891 AC108860.2-201ENST00000562760 2183 ntBASIC13.04□□□□□ -0.32
RPL39P62891 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 OR6D1P-203ENST00000641209 4860 ntBASIC13.04□□□□□ -0.32
RPL39P62891 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.04□□□□□ -0.32
RPL39P62891 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.04□□□□□ -0.32
RPL39P62891 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.04□□□□□ -0.32
RPL39P62891 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.04□□□□□ -0.32
RPL39P62891 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.04□□□□□ -0.32
RPL39P62891 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 AC120498.8-201ENST00000614275 531 ntBASIC13.04□□□□□ -0.32
RPL39P62891 HLA-A-209ENST00000638375 975 ntBASIC13.04□□□□□ -0.32
RPL39P62891 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 AC008556.1-201ENST00000610908 2040 ntBASIC13.04□□□□□ -0.32
RPL39P62891 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RPL39P62891 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RPL39P62891 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RPL39P62891 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPL39P62891 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.04□□□□□ -0.32
RPL39P62891 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms