Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PER3P56645 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PER3P56645 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PER3P56645 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.07■□□□□ 0.32
PER3P56645 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PER3P56645 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PER3P56645 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PER3P56645 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.06■□□□□ 0.32
PER3P56645 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
PER3P56645 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.06■□□□□ 0.32
PER3P56645 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.06■□□□□ 0.32
PER3P56645 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.06■□□□□ 0.32
PER3P56645 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PER3P56645 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PER3P56645 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.06■□□□□ 0.32
PER3P56645 FAAHP1-202ENST00000446499 1238 ntBASIC17.06■□□□□ 0.32
PER3P56645 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.06■□□□□ 0.32
PER3P56645 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.06■□□□□ 0.32
PER3P56645 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.06■□□□□ 0.32
PER3P56645 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.06■□□□□ 0.32
PER3P56645 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PER3P56645 KRT8P41-201ENST00000533985 1514 ntBASIC17.06■□□□□ 0.32
PER3P56645 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.06■□□□□ 0.32
PER3P56645 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.05■□□□□ 0.32
PER3P56645 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.05■□□□□ 0.32
PER3P56645 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.05■□□□□ 0.32
PER3P56645 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.05■□□□□ 0.32
PER3P56645 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.05■□□□□ 0.32
PER3P56645 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.05■□□□□ 0.32
PER3P56645 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PER3P56645 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.05■□□□□ 0.32
PER3P56645 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PER3P56645 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
PER3P56645 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.05■□□□□ 0.32
PER3P56645 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
PER3P56645 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PER3P56645 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PER3P56645 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PER3P56645 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PER3P56645 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PER3P56645 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.05■□□□□ 0.32
PER3P56645 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PER3P56645 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.04■□□□□ 0.32
PER3P56645 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.04■□□□□ 0.32
PER3P56645 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.04■□□□□ 0.32
PER3P56645 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.04■□□□□ 0.32
PER3P56645 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.04■□□□□ 0.32
PER3P56645 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
PER3P56645 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.04■□□□□ 0.32
PER3P56645 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.04■□□□□ 0.32
PER3P56645 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
PER3P56645 AC034232.1-201ENST00000506026 1064 ntBASIC17.04■□□□□ 0.32
PER3P56645 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms