Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.75□□□□□ -0.21
CMC4P56277 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 KRT8P50-201ENST00000562022 1438 ntBASIC13.75□□□□□ -0.21
CMC4P56277 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.75□□□□□ -0.21
CMC4P56277 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CMC4P56277 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.75□□□□□ -0.21
CMC4P56277 RASA4DP-201ENST00000460726 1199 ntBASIC13.75□□□□□ -0.21
CMC4P56277 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.75□□□□□ -0.21
CMC4P56277 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.75□□□□□ -0.21
CMC4P56277 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.75□□□□□ -0.21
CMC4P56277 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.75□□□□□ -0.21
CMC4P56277 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.75□□□□□ -0.21
CMC4P56277 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
CMC4P56277 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 AL031598.1-201ENST00000561511 1773 ntBASIC13.75□□□□□ -0.21
CMC4P56277 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC13.75□□□□□ -0.21
CMC4P56277 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.75□□□□□ -0.21
CMC4P56277 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.75□□□□□ -0.21
CMC4P56277 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.75□□□□□ -0.21
CMC4P56277 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CMC4P56277 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CMC4P56277 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CMC4P56277 AC009102.3-201ENST00000623118 1491 ntBASIC13.74□□□□□ -0.21
CMC4P56277 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
CMC4P56277 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CMC4P56277 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CMC4P56277 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
CMC4P56277 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CMC4P56277 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.74□□□□□ -0.21
CMC4P56277 PVRIG2P-201ENST00000435460 978 ntBASIC13.74□□□□□ -0.21
CMC4P56277 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.74□□□□□ -0.21
CMC4P56277 AC022616.7-201ENST00000525383 220 ntBASIC13.74□□□□□ -0.21
CMC4P56277 AL441883.1-201ENST00000566170 1045 ntBASIC13.74□□□□□ -0.21
CMC4P56277 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CMC4P56277 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CMC4P56277 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CMC4P56277 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.74□□□□□ -0.21
CMC4P56277 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.74□□□□□ -0.21
CMC4P56277 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.73□□□□□ -0.21
CMC4P56277 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMC4P56277 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMC4P56277 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMC4P56277 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.73□□□□□ -0.21
CMC4P56277 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMC4P56277 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CMC4P56277 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMC4P56277 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMC4P56277 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMC4P56277 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMC4P56277 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMC4P56277 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.73□□□□□ -0.21
CMC4P56277 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.73□□□□□ -0.21
CMC4P56277 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.73□□□□□ -0.21
CMC4P56277 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.73□□□□□ -0.21
CMC4P56277 AC006011.2-201ENST00000621313 1158 ntBASIC13.73□□□□□ -0.21
CMC4P56277 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.73□□□□□ -0.21
CMC4P56277 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMC4P56277 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMC4P56277 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.73□□□□□ -0.21
CMC4P56277 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CMC4P56277 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CMC4P56277 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMC4P56277 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
CMC4P56277 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.73□□□□□ -0.21
CMC4P56277 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMC4P56277 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMC4P56277 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CMC4P56277 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms