Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.52■□□□□ 0.4
LIM2P55344 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.52■□□□□ 0.4
LIM2P55344 AC024243.1-201ENST00000609234 778 ntBASIC17.52■□□□□ 0.4
LIM2P55344 AC092865.7-201ENST00000641832 219 ntBASIC17.52■□□□□ 0.4
LIM2P55344 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LIM2P55344 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LIM2P55344 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LIM2P55344 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
LIM2P55344 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LIM2P55344 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
LIM2P55344 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LIM2P55344 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LIM2P55344 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.52■□□□□ 0.39
LIM2P55344 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
LIM2P55344 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.52■□□□□ 0.39
LIM2P55344 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.51■□□□□ 0.39
LIM2P55344 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIM2P55344 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIM2P55344 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIM2P55344 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIM2P55344 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIM2P55344 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIM2P55344 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.51■□□□□ 0.39
LIM2P55344 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIM2P55344 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LIM2P55344 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIM2P55344 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LIM2P55344 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIM2P55344 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.51■□□□□ 0.39
LIM2P55344 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.51■□□□□ 0.39
LIM2P55344 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.51■□□□□ 0.39
LIM2P55344 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.51■□□□□ 0.39
LIM2P55344 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.51■□□□□ 0.39
LIM2P55344 COX11P1-201ENST00000489116 835 ntBASIC17.51■□□□□ 0.39
LIM2P55344 AC104390.1-201ENST00000555663 520 ntBASIC17.51■□□□□ 0.39
LIM2P55344 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.51■□□□□ 0.39
LIM2P55344 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.51■□□□□ 0.39
LIM2P55344 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LIM2P55344 AL023973.1-201ENST00000624619 620 ntBASIC17.51■□□□□ 0.39
LIM2P55344 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.51■□□□□ 0.39
LIM2P55344 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.51■□□□□ 0.39
LIM2P55344 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.51■□□□□ 0.39
LIM2P55344 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIM2P55344 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIM2P55344 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.51■□□□□ 0.39
LIM2P55344 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LIM2P55344 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIM2P55344 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIM2P55344 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIM2P55344 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIM2P55344 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIM2P55344 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIM2P55344 LETM1P2-201ENST00000597330 2178 ntBASIC17.5■□□□□ 0.39
LIM2P55344 AC005332.8-201ENST00000622750 2735 ntBASIC17.5■□□□□ 0.39
LIM2P55344 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.5■□□□□ 0.39
LIM2P55344 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIM2P55344 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIM2P55344 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.5■□□□□ 0.39
LIM2P55344 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LIM2P55344 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIM2P55344 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.5■□□□□ 0.39
LIM2P55344 SEC1P-202ENST00000473944 940 ntBASIC17.5■□□□□ 0.39
LIM2P55344 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIM2P55344 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LIM2P55344 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIM2P55344 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.5■□□□□ 0.39
LIM2P55344 AC140113.3-201ENST00000605663 199 ntBASIC17.5■□□□□ 0.39
LIM2P55344 AC139887.4-201ENST00000607877 719 ntBASIC17.5■□□□□ 0.39
LIM2P55344 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LIM2P55344 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIM2P55344 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LIM2P55344 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIM2P55344 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIM2P55344 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LIM2P55344 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.5■□□□□ 0.39
LIM2P55344 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.5■□□□□ 0.39
LIM2P55344 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIM2P55344 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIM2P55344 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIM2P55344 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIM2P55344 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIM2P55344 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LIM2P55344 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIM2P55344 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIM2P55344 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIM2P55344 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.49■□□□□ 0.39
LIM2P55344 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.49■□□□□ 0.39
LIM2P55344 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.49■□□□□ 0.39
LIM2P55344 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.49■□□□□ 0.39
LIM2P55344 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIM2P55344 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIM2P55344 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.49■□□□□ 0.39
LIM2P55344 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.49■□□□□ 0.39
LIM2P55344 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.49■□□□□ 0.39
LIM2P55344 RN7SL850P-201ENST00000579959 291 ntBASIC17.49■□□□□ 0.39
LIM2P55344 AL031432.5-201ENST00000641059 760 ntBASIC17.49■□□□□ 0.39
LIM2P55344 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIM2P55344 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIM2P55344 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LIM2P55344 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms