Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CLTCL1P53675 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CLTCL1P53675 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CLTCL1P53675 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC26.33■■□□□ 1.8
CLTCL1P53675 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CLTCL1P53675 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLTCL1P53675 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLTCL1P53675 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CLTCL1P53675 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC26.32■■□□□ 1.8
CLTCL1P53675 POM121L3P-201ENST00000419331 1163 ntBASIC26.32■■□□□ 1.8
CLTCL1P53675 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLTCL1P53675 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC26.32■■□□□ 1.8
CLTCL1P53675 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLTCL1P53675 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLTCL1P53675 ANO7L1-203ENST00000602586 1720 ntBASIC26.32■■□□□ 1.8
CLTCL1P53675 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC26.32■■□□□ 1.8
CLTCL1P53675 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLTCL1P53675 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
CLTCL1P53675 AC116562.4-201ENST00000641316 2276 ntBASIC26.32■■□□□ 1.8
CLTCL1P53675 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CLTCL1P53675 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC26.32■■□□□ 1.8
CLTCL1P53675 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLTCL1P53675 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLTCL1P53675 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLTCL1P53675 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CLTCL1P53675 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
CLTCL1P53675 TEX30-205ENST00000376029 959 ntTSL 2 BASIC26.32■■□□□ 1.8
CLTCL1P53675 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CLTCL1P53675 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
CLTCL1P53675 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CLTCL1P53675 GZMM-202ENST00000592501 941 ntTSL 3 BASIC26.32■■□□□ 1.8
CLTCL1P53675 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC26.31■■□□□ 1.8
CLTCL1P53675 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLTCL1P53675 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC26.31■■□□□ 1.8
CLTCL1P53675 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLTCL1P53675 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLTCL1P53675 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLTCL1P53675 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC26.31■■□□□ 1.8
CLTCL1P53675 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CLTCL1P53675 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
CLTCL1P53675 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC26.31■■□□□ 1.8
CLTCL1P53675 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC26.3■■□□□ 1.8
CLTCL1P53675 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLTCL1P53675 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLTCL1P53675 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLTCL1P53675 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
CLTCL1P53675 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC26.3■■□□□ 1.8
CLTCL1P53675 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC26.3■■□□□ 1.8
CLTCL1P53675 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLTCL1P53675 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CLTCL1P53675 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC26.3■■□□□ 1.8
CLTCL1P53675 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CLTCL1P53675 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLTCL1P53675 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLTCL1P53675 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLTCL1P53675 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CLTCL1P53675 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC26.3■■□□□ 1.8
CLTCL1P53675 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC26.3■■□□□ 1.8
CLTCL1P53675 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLTCL1P53675 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CLTCL1P53675 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
CLTCL1P53675 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC26.29■■□□□ 1.8
CLTCL1P53675 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLTCL1P53675 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC26.29■■□□□ 1.8
CLTCL1P53675 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLTCL1P53675 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CLTCL1P53675 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLTCL1P53675 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CLTCL1P53675 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CLTCL1P53675 THAP5-204ENST00000438865 868 ntTSL 2 BASIC26.29■■□□□ 1.8
CLTCL1P53675 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC26.29■■□□□ 1.8
CLTCL1P53675 CALM1-205ENST00000553542 877 ntTSL 5 BASIC26.29■■□□□ 1.8
CLTCL1P53675 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC26.29■■□□□ 1.8
CLTCL1P53675 ABBA01031661.1-201ENST00000634362 1253 ntBASIC26.29■■□□□ 1.8
CLTCL1P53675 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLTCL1P53675 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CLTCL1P53675 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLTCL1P53675 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC26.29■■□□□ 1.8
CLTCL1P53675 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLTCL1P53675 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
CLTCL1P53675 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLTCL1P53675 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CLTCL1P53675 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CLTCL1P53675 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CLTCL1P53675 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLTCL1P53675 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLTCL1P53675 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLTCL1P53675 MED22-202ENST00000371999 987 ntTSL 3 BASIC26.28■■□□□ 1.8
CLTCL1P53675 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CLTCL1P53675 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC26.28■■□□□ 1.8
CLTCL1P53675 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC26.28■■□□□ 1.8
CLTCL1P53675 AL049840.3-201ENST00000602669 611 ntBASIC26.28■■□□□ 1.8
CLTCL1P53675 AC009154.2-201ENST00000621177 724 ntBASIC26.28■■□□□ 1.8
CLTCL1P53675 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CLTCL1P53675 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CLTCL1P53675 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC26.28■■□□□ 1.8
CLTCL1P53675 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLTCL1P53675 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC26.28■■□□□ 1.8
CLTCL1P53675 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLTCL1P53675 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms