Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.99■□□□□ 0.95
TM4SF4P48230 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.99■□□□□ 0.95
TM4SF4P48230 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.99■□□□□ 0.95
TM4SF4P48230 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.99■□□□□ 0.95
TM4SF4P48230 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.99■□□□□ 0.95
TM4SF4P48230 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 PGM5P2-202ENST00000637225 1043 ntBASIC20.99■□□□□ 0.95
TM4SF4P48230 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.99■□□□□ 0.95
TM4SF4P48230 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.99■□□□□ 0.95
TM4SF4P48230 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.99■□□□□ 0.95
TM4SF4P48230 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.99■□□□□ 0.95
TM4SF4P48230 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF4P48230 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.98■□□□□ 0.95
TM4SF4P48230 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF4P48230 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
TM4SF4P48230 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF4P48230 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF4P48230 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TM4SF4P48230 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF4P48230 KRT18P27-201ENST00000427733 1299 ntBASIC20.98■□□□□ 0.95
TM4SF4P48230 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.98■□□□□ 0.95
TM4SF4P48230 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.98■□□□□ 0.95
TM4SF4P48230 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TM4SF4P48230 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.98■□□□□ 0.95
TM4SF4P48230 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF4P48230 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF4P48230 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF4P48230 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF4P48230 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.98■□□□□ 0.95
TM4SF4P48230 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF4P48230 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.97■□□□□ 0.95
TM4SF4P48230 FP475955.4-201ENST00000623131 1990 ntBASIC20.97■□□□□ 0.95
TM4SF4P48230 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF4P48230 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TM4SF4P48230 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF4P48230 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF4P48230 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF4P48230 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.97■□□□□ 0.95
TM4SF4P48230 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF4P48230 MIR770-201ENST00000390219 98 ntBASIC20.97■□□□□ 0.95
TM4SF4P48230 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.97■□□□□ 0.95
TM4SF4P48230 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.97■□□□□ 0.95
TM4SF4P48230 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TM4SF4P48230 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.97■□□□□ 0.95
TM4SF4P48230 AP002472.1-201ENST00000577490 586 ntBASIC20.97■□□□□ 0.95
TM4SF4P48230 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
TM4SF4P48230 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.97■□□□□ 0.95
TM4SF4P48230 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.97■□□□□ 0.95
TM4SF4P48230 AC239800.4-201ENST00000603712 296 ntBASIC20.97■□□□□ 0.95
TM4SF4P48230 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.97■□□□□ 0.95
TM4SF4P48230 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF4P48230 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TM4SF4P48230 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF4P48230 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.97■□□□□ 0.95
TM4SF4P48230 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF4P48230 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF4P48230 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.97■□□□□ 0.95
TM4SF4P48230 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TM4SF4P48230 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.96■□□□□ 0.95
TM4SF4P48230 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
TM4SF4P48230 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF4P48230 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF4P48230 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF4P48230 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF4P48230 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TM4SF4P48230 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.96■□□□□ 0.95
TM4SF4P48230 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TM4SF4P48230 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.96■□□□□ 0.95
TM4SF4P48230 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.96■□□□□ 0.95
TM4SF4P48230 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.96■□□□□ 0.95
TM4SF4P48230 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.96■□□□□ 0.95
TM4SF4P48230 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.96■□□□□ 0.95
TM4SF4P48230 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF4P48230 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF4P48230 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF4P48230 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF4P48230 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF4P48230 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF4P48230 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF4P48230 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
TM4SF4P48230 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.95■□□□□ 0.95
TM4SF4P48230 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TM4SF4P48230 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF4P48230 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF4P48230 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF4P48230 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF4P48230 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF4P48230 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TM4SF4P48230 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.95■□□□□ 0.94
TM4SF4P48230 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF4P48230 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.95■□□□□ 0.94
TM4SF4P48230 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.95■□□□□ 0.94
TM4SF4P48230 CNN2P11-201ENST00000429351 262 ntBASIC20.95■□□□□ 0.94
TM4SF4P48230 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.95■□□□□ 0.94
TM4SF4P48230 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.95■□□□□ 0.94
TM4SF4P48230 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.95■□□□□ 0.94
TM4SF4P48230 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.95■□□□□ 0.94
TM4SF4P48230 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.95■□□□□ 0.94
TM4SF4P48230 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms