Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.88■□□□□ 0.29
RFC3P40938 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFC3P40938 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.88■□□□□ 0.29
RFC3P40938 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
RFC3P40938 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RFC3P40938 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RFC3P40938 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
RFC3P40938 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 AL357033.4-201ENST00000617703 1807 ntBASIC16.87■□□□□ 0.29
RFC3P40938 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RFC3P40938 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RFC3P40938 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RFC3P40938 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.87■□□□□ 0.29
RFC3P40938 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.87■□□□□ 0.29
RFC3P40938 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.87■□□□□ 0.29
RFC3P40938 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.87■□□□□ 0.29
RFC3P40938 CLEC4GP1-201ENST00000596555 870 ntBASIC16.87■□□□□ 0.29
RFC3P40938 AL121894.2-201ENST00000602977 491 ntBASIC16.87■□□□□ 0.29
RFC3P40938 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.87■□□□□ 0.29
RFC3P40938 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.87■□□□□ 0.29
RFC3P40938 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RFC3P40938 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 HOXB1-202ENST00000577092 1414 ntBASIC16.87■□□□□ 0.29
RFC3P40938 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFC3P40938 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.86■□□□□ 0.29
RFC3P40938 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.86■□□□□ 0.29
RFC3P40938 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RFC3P40938 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
RFC3P40938 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.86■□□□□ 0.29
RFC3P40938 HLA-F-220ENST00000434407 884 ntBASIC16.86■□□□□ 0.29
RFC3P40938 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.86■□□□□ 0.29
RFC3P40938 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.86■□□□□ 0.29
RFC3P40938 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.86■□□□□ 0.29
RFC3P40938 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.86■□□□□ 0.29
RFC3P40938 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFC3P40938 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.86■□□□□ 0.29
RFC3P40938 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
RFC3P40938 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.85■□□□□ 0.29
RFC3P40938 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RFC3P40938 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC3P40938 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RFC3P40938 HEIH-201ENST00000623091 1652 ntBASIC16.85■□□□□ 0.29
RFC3P40938 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.85■□□□□ 0.29
RFC3P40938 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RFC3P40938 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFC3P40938 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC3P40938 Z98044.1-201ENST00000632503 1764 ntBASIC16.85■□□□□ 0.29
RFC3P40938 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.85■□□□□ 0.29
RFC3P40938 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RFC3P40938 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC3P40938 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RFC3P40938 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RFC3P40938 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
RFC3P40938 DUSP5P1-201ENST00000441325 1139 ntBASIC16.85■□□□□ 0.29
RFC3P40938 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.85■□□□□ 0.29
RFC3P40938 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RFC3P40938 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RFC3P40938 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.85■□□□□ 0.29
RFC3P40938 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.85■□□□□ 0.29
RFC3P40938 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.85■□□□□ 0.29
RFC3P40938 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms