Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL15A1P39059 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL15A1P39059 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL15A1P39059 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL15A1P39059 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC23.34■■□□□ 1.33
COL15A1P39059 AC148477.8-201ENST00000624298 468 ntBASIC23.34■■□□□ 1.33
COL15A1P39059 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.34■■□□□ 1.33
COL15A1P39059 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL15A1P39059 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
COL15A1P39059 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL15A1P39059 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL15A1P39059 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.34■■□□□ 1.33
COL15A1P39059 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL15A1P39059 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL15A1P39059 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL15A1P39059 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL15A1P39059 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL15A1P39059 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL15A1P39059 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL15A1P39059 MIR574-201ENST00000385209 96 ntBASIC23.33■■□□□ 1.33
COL15A1P39059 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL15A1P39059 DDT-203ENST00000403754 569 ntTSL 3 BASIC23.33■■□□□ 1.33
COL15A1P39059 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL15A1P39059 DDT-206ENST00000430101 573 ntTSL 2 BASIC23.33■■□□□ 1.33
COL15A1P39059 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC23.33■■□□□ 1.33
COL15A1P39059 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
COL15A1P39059 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC23.33■■□□□ 1.33
COL15A1P39059 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC23.33■■□□□ 1.33
COL15A1P39059 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL15A1P39059 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC23.33■■□□□ 1.33
COL15A1P39059 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.33■■□□□ 1.33
COL15A1P39059 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.33■■□□□ 1.32
COL15A1P39059 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
COL15A1P39059 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.33■■□□□ 1.32
COL15A1P39059 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
COL15A1P39059 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL15A1P39059 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL15A1P39059 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL15A1P39059 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL15A1P39059 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL15A1P39059 MED22-202ENST00000371999 987 ntTSL 3 BASIC23.32■■□□□ 1.32
COL15A1P39059 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.32■■□□□ 1.32
COL15A1P39059 AL031284.1-201ENST00000419297 478 ntBASIC23.32■■□□□ 1.32
COL15A1P39059 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC23.32■■□□□ 1.32
COL15A1P39059 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC23.32■■□□□ 1.32
COL15A1P39059 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC23.32■■□□□ 1.32
COL15A1P39059 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.32■■□□□ 1.32
COL15A1P39059 MIR7706-201ENST00000613747 67 ntBASIC23.32■■□□□ 1.32
COL15A1P39059 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL15A1P39059 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL15A1P39059 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL15A1P39059 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL15A1P39059 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL15A1P39059 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL15A1P39059 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL15A1P39059 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL15A1P39059 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL15A1P39059 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL15A1P39059 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC23.31■■□□□ 1.32
COL15A1P39059 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC23.31■■□□□ 1.32
COL15A1P39059 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC23.31■■□□□ 1.32
COL15A1P39059 AC005336.2-201ENST00000593183 939 ntBASIC23.31■■□□□ 1.32
COL15A1P39059 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC23.31■■□□□ 1.32
COL15A1P39059 AL591684.3-201ENST00000605187 298 ntBASIC23.31■■□□□ 1.32
COL15A1P39059 AC008608.2-201ENST00000606089 416 ntBASIC23.31■■□□□ 1.32
COL15A1P39059 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.31■■□□□ 1.32
COL15A1P39059 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.31■■□□□ 1.32
COL15A1P39059 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
COL15A1P39059 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL15A1P39059 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL15A1P39059 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
COL15A1P39059 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.31■■□□□ 1.32
COL15A1P39059 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL15A1P39059 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL15A1P39059 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.31■■□□□ 1.32
COL15A1P39059 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL15A1P39059 AL163051.1-201ENST00000569214 1512 ntBASIC23.3■■□□□ 1.32
COL15A1P39059 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL15A1P39059 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
COL15A1P39059 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC23.3■■□□□ 1.32
COL15A1P39059 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL15A1P39059 AC018712.1-201ENST00000455767 687 ntBASIC23.3■■□□□ 1.32
COL15A1P39059 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC23.3■■□□□ 1.32
COL15A1P39059 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
COL15A1P39059 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL15A1P39059 AC243591.1-201ENST00000452967 1364 ntBASIC23.3■■□□□ 1.32
COL15A1P39059 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL15A1P39059 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL15A1P39059 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL15A1P39059 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL15A1P39059 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
COL15A1P39059 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL15A1P39059 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL15A1P39059 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL15A1P39059 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL15A1P39059 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL15A1P39059 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC23.29■■□□□ 1.32
COL15A1P39059 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.29■■□□□ 1.32
COL15A1P39059 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC23.29■■□□□ 1.32
COL15A1P39059 MIR5100-201ENST00000579544 119 ntBASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms