Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN7P35236 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN7P35236 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN7P35236 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
PTPN7P35236 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.08■□□□□ 0.64
PTPN7P35236 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.08■□□□□ 0.64
PTPN7P35236 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.08■□□□□ 0.64
PTPN7P35236 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.08■□□□□ 0.64
PTPN7P35236 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.08■□□□□ 0.64
PTPN7P35236 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.08■□□□□ 0.64
PTPN7P35236 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PTPN7P35236 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN7P35236 PHGDH-209ENST00000641074 1780 ntBASIC19.08■□□□□ 0.64
PTPN7P35236 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.08■□□□□ 0.64
PTPN7P35236 AL096828.2-201ENST00000567259 1965 ntBASIC19.08■□□□□ 0.64
PTPN7P35236 AC092338.2-201ENST00000568827 1415 ntBASIC19.08■□□□□ 0.64
PTPN7P35236 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPN7P35236 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.08■□□□□ 0.64
PTPN7P35236 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.08■□□□□ 0.64
PTPN7P35236 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PTPN7P35236 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN7P35236 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN7P35236 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN7P35236 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PTPN7P35236 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN7P35236 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN7P35236 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN7P35236 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN7P35236 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN7P35236 UNC93B2-201ENST00000285383 730 ntBASIC19.07■□□□□ 0.64
PTPN7P35236 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN7P35236 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN7P35236 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN7P35236 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPN7P35236 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN7P35236 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN7P35236 CR769767.2-201ENST00000622735 460 ntBASIC19.07■□□□□ 0.64
PTPN7P35236 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
PTPN7P35236 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN7P35236 PCDHB18P-201ENST00000524813 2368 ntBASIC19.07■□□□□ 0.64
PTPN7P35236 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN7P35236 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN7P35236 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN7P35236 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPN7P35236 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PTPN7P35236 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPN7P35236 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.06■□□□□ 0.64
PTPN7P35236 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
PTPN7P35236 FITM1-202ENST00000559294 800 ntBASIC19.06■□□□□ 0.64
PTPN7P35236 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.06■□□□□ 0.64
PTPN7P35236 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
PTPN7P35236 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPN7P35236 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PTPN7P35236 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTPN7P35236 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.06■□□□□ 0.64
PTPN7P35236 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.06■□□□□ 0.64
PTPN7P35236 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN7P35236 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN7P35236 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN7P35236 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PTPN7P35236 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN7P35236 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN7P35236 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN7P35236 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN7P35236 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPN7P35236 AC067852.2-201ENST00000590513 2313 ntBASIC19.05■□□□□ 0.64
PTPN7P35236 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN7P35236 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PTPN7P35236 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.05■□□□□ 0.64
PTPN7P35236 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN7P35236 KRT18P23-201ENST00000435622 1283 ntBASIC19.05■□□□□ 0.64
PTPN7P35236 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPN7P35236 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPN7P35236 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN7P35236 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN7P35236 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN7P35236 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.05■□□□□ 0.64
PTPN7P35236 MIR3180-4-201ENST00000582223 153 ntBASIC19.05■□□□□ 0.64
PTPN7P35236 MIR4785-201ENST00000585005 73 ntBASIC19.05■□□□□ 0.64
PTPN7P35236 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.05■□□□□ 0.64
PTPN7P35236 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN7P35236 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN7P35236 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms