Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A4P31645 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A4P31645 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A4P31645 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A4P31645 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A4P31645 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC6A4P31645 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A4P31645 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A4P31645 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC6A4P31645 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC6A4P31645 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A4P31645 KRT18P48-201ENST00000434763 852 ntBASIC18.9■□□□□ 0.62
SLC6A4P31645 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SLC6A4P31645 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A4P31645 AP003733.1-201ENST00000491725 852 ntBASIC18.9■□□□□ 0.62
SLC6A4P31645 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.9■□□□□ 0.62
SLC6A4P31645 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SLC6A4P31645 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A4P31645 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A4P31645 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC6A4P31645 AC016734.2-201ENST00000624325 1377 ntBASIC18.9■□□□□ 0.62
SLC6A4P31645 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC6A4P31645 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A4P31645 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC6A4P31645 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A4P31645 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SLC6A4P31645 Z83836.1-201ENST00000624605 1642 ntBASIC18.89■□□□□ 0.62
SLC6A4P31645 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A4P31645 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A4P31645 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC6A4P31645 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A4P31645 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A4P31645 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC6A4P31645 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A4P31645 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A4P31645 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A4P31645 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC6A4P31645 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC6A4P31645 AC005332.3-201ENST00000589904 676 ntBASIC18.89■□□□□ 0.61
SLC6A4P31645 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A4P31645 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SLC6A4P31645 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC6A4P31645 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC6A4P31645 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A4P31645 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC6A4P31645 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SLC6A4P31645 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A4P31645 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A4P31645 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC6A4P31645 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A4P31645 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A4P31645 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A4P31645 AL024508.2-201ENST00000607749 1894 ntBASIC18.88■□□□□ 0.61
SLC6A4P31645 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A4P31645 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SLC6A4P31645 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A4P31645 TSPY22P-201ENST00000427496 604 ntBASIC18.88■□□□□ 0.61
SLC6A4P31645 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.88■□□□□ 0.61
SLC6A4P31645 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC6A4P31645 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
SLC6A4P31645 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC6A4P31645 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC6A4P31645 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC6A4P31645 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A4P31645 AL390719.2-201ENST00000606993 987 ntBASIC18.88■□□□□ 0.61
SLC6A4P31645 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
SLC6A4P31645 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC6A4P31645 NPAP1P7-201ENST00000613027 823 ntBASIC18.88■□□□□ 0.61
SLC6A4P31645 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SLC6A4P31645 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
SLC6A4P31645 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC6A4P31645 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SLC6A4P31645 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SLC6A4P31645 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.88■□□□□ 0.61
SLC6A4P31645 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A4P31645 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A4P31645 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A4P31645 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A4P31645 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A4P31645 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A4P31645 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A4P31645 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A4P31645 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.87■□□□□ 0.61
SLC6A4P31645 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A4P31645 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SLC6A4P31645 IGHGP-201ENST00000390555 1178 ntBASIC18.87■□□□□ 0.61
SLC6A4P31645 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A4P31645 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC6A4P31645 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A4P31645 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A4P31645 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC6A4P31645 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A4P31645 BX276092.5-203ENST00000456199 560 ntBASIC18.87■□□□□ 0.61
SLC6A4P31645 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SLC6A4P31645 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.87■□□□□ 0.61
SLC6A4P31645 KRT8P26-201ENST00000534154 1276 ntBASIC18.87■□□□□ 0.61
SLC6A4P31645 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A4P31645 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.87■□□□□ 0.61
SLC6A4P31645 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SLC6A4P31645 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms