Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AP000997.3-201ENST00000623333 2250 ntBASIC16.91■□□□□ 0.3
SHC1P29353 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SHC1P29353 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SHC1P29353 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SHC1P29353 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.91■□□□□ 0.3
SHC1P29353 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SHC1P29353 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.91■□□□□ 0.3
SHC1P29353 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SHC1P29353 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SHC1P29353 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.91■□□□□ 0.3
SHC1P29353 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.91■□□□□ 0.3
SHC1P29353 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.91■□□□□ 0.3
SHC1P29353 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.91■□□□□ 0.3
SHC1P29353 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SHC1P29353 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SHC1P29353 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SHC1P29353 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.91■□□□□ 0.3
SHC1P29353 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.91■□□□□ 0.3
SHC1P29353 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.91■□□□□ 0.3
SHC1P29353 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SHC1P29353 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.91■□□□□ 0.3
SHC1P29353 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SHC1P29353 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SHC1P29353 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SHC1P29353 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SHC1P29353 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC1P29353 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 AC036111.1-201ENST00000533973 1582 ntBASIC16.9■□□□□ 0.3
SHC1P29353 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.9■□□□□ 0.3
SHC1P29353 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.9■□□□□ 0.3
SHC1P29353 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 AC005521.1-201ENST00000393351 872 ntBASIC16.9■□□□□ 0.3
SHC1P29353 HMGA1P5-201ENST00000412453 271 ntBASIC16.9■□□□□ 0.3
SHC1P29353 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.9■□□□□ 0.3
SHC1P29353 MCCD1P1-208ENST00000445732 328 ntBASIC16.9■□□□□ 0.3
SHC1P29353 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.9■□□□□ 0.3
SHC1P29353 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.9■□□□□ 0.3
SHC1P29353 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.9■□□□□ 0.3
SHC1P29353 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
SHC1P29353 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 AC005363.2-201ENST00000618631 242 ntBASIC16.9■□□□□ 0.3
SHC1P29353 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.9■□□□□ 0.3
SHC1P29353 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SHC1P29353 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.9■□□□□ 0.3
SHC1P29353 HEIH-201ENST00000623091 1652 ntBASIC16.9■□□□□ 0.3
SHC1P29353 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 MTMR9LP-203ENST00000426597 1545 ntBASIC16.9■□□□□ 0.3
SHC1P29353 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.9■□□□□ 0.3
SHC1P29353 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SHC1P29353 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.9■□□□□ 0.3
SHC1P29353 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SHC1P29353 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHC1P29353 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SHC1P29353 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.89■□□□□ 0.3
SHC1P29353 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SHC1P29353 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SHC1P29353 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC1P29353 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.89■□□□□ 0.29
SHC1P29353 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.89■□□□□ 0.29
SHC1P29353 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC1P29353 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SHC1P29353 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC1P29353 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC1P29353 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.89■□□□□ 0.29
SHC1P29353 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHC1P29353 TERF1P1-201ENST00000311003 1181 ntBASIC16.89■□□□□ 0.29
SHC1P29353 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.89■□□□□ 0.29
SHC1P29353 AC113347.1-201ENST00000413321 391 ntBASIC16.89■□□□□ 0.29
SHC1P29353 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.89■□□□□ 0.29
SHC1P29353 KRT18P57-201ENST00000443599 1254 ntBASIC16.89■□□□□ 0.29
SHC1P29353 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.89■□□□□ 0.29
SHC1P29353 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHC1P29353 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHC1P29353 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.89■□□□□ 0.29
SHC1P29353 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.89■□□□□ 0.29
SHC1P29353 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms