Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTGFP29279 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.75■□□□□ 0.91
CTGFP29279 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.75■□□□□ 0.91
CTGFP29279 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTGFP29279 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTGFP29279 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.75■□□□□ 0.91
CTGFP29279 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTGFP29279 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CTGFP29279 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.74■□□□□ 0.91
CTGFP29279 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTGFP29279 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CTGFP29279 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTGFP29279 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTGFP29279 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTGFP29279 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTGFP29279 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.74■□□□□ 0.91
CTGFP29279 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTGFP29279 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.74■□□□□ 0.91
CTGFP29279 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.74■□□□□ 0.91
CTGFP29279 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTGFP29279 NKAPP1-205ENST00000585790 367 ntBASIC20.74■□□□□ 0.91
CTGFP29279 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTGFP29279 AC083906.6-201ENST00000641366 219 ntBASIC20.74■□□□□ 0.91
CTGFP29279 AC079781.4-201ENST00000641908 219 ntBASIC20.74■□□□□ 0.91
CTGFP29279 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.74■□□□□ 0.91
CTGFP29279 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CTGFP29279 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.74■□□□□ 0.91
CTGFP29279 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTGFP29279 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.73■□□□□ 0.91
CTGFP29279 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTGFP29279 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
CTGFP29279 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.73■□□□□ 0.91
CTGFP29279 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CTGFP29279 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.73■□□□□ 0.91
CTGFP29279 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTGFP29279 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTGFP29279 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTGFP29279 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.73■□□□□ 0.91
CTGFP29279 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTGFP29279 AC009947.1-201ENST00000444350 727 ntBASIC20.73■□□□□ 0.91
CTGFP29279 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTGFP29279 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.73■□□□□ 0.91
CTGFP29279 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.73■□□□□ 0.91
CTGFP29279 AC105339.3-201ENST00000560043 636 ntBASIC20.73■□□□□ 0.91
CTGFP29279 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTGFP29279 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.73■□□□□ 0.91
CTGFP29279 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.73■□□□□ 0.91
CTGFP29279 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
CTGFP29279 AC141586.3-201ENST00000562166 1838 ntBASIC20.73■□□□□ 0.91
CTGFP29279 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTGFP29279 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTGFP29279 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.72■□□□□ 0.91
CTGFP29279 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.72■□□□□ 0.91
CTGFP29279 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.72■□□□□ 0.91
CTGFP29279 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.72■□□□□ 0.91
CTGFP29279 MTDHP4-201ENST00000600287 670 ntBASIC20.72■□□□□ 0.91
CTGFP29279 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.72■□□□□ 0.91
CTGFP29279 AC107918.4-202ENST00000641623 219 ntBASIC20.72■□□□□ 0.91
CTGFP29279 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.72■□□□□ 0.91
CTGFP29279 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.72■□□□□ 0.91
CTGFP29279 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.72■□□□□ 0.91
CTGFP29279 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTGFP29279 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTGFP29279 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CTGFP29279 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.71■□□□□ 0.91
CTGFP29279 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CTGFP29279 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CTGFP29279 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.71■□□□□ 0.91
CTGFP29279 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.71■□□□□ 0.91
CTGFP29279 RNA5SP416-201ENST00000516838 111 ntBASIC20.71■□□□□ 0.91
CTGFP29279 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.71■□□□□ 0.91
CTGFP29279 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CTGFP29279 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.71■□□□□ 0.91
CTGFP29279 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTGFP29279 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
CTGFP29279 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CTGFP29279 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTGFP29279 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CTGFP29279 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.71■□□□□ 0.91
CTGFP29279 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CTGFP29279 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTGFP29279 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTGFP29279 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.71■□□□□ 0.91
CTGFP29279 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTGFP29279 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms