Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40ALP0C0E4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 AC090616.6-201ENST00000582640 721 ntBASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40ALP0C0E4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 Z83836.1-201ENST00000624605 1642 ntBASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 AC026396.1-201ENST00000419388 421 ntBASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 AC005332.3-201ENST00000589904 676 ntBASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40ALP0C0E4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 Z98044.1-201ENST00000632503 1764 ntBASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 KRT18P41-201ENST00000518924 1277 ntBASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 TPSP2-201ENST00000561760 610 ntBASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 AC024563.2-201ENST00000603282 481 ntBASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 AL390719.2-201ENST00000606993 987 ntBASIC17.35■□□□□ 0.37
RAB40ALP0C0E4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms