Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.17■□□□□ 0.82
CLTAP09496 MIR3180-4-201ENST00000582223 153 ntBASIC20.17■□□□□ 0.82
CLTAP09496 AC010240.3-201ENST00000607688 395 ntBASIC20.17■□□□□ 0.82
CLTAP09496 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.17■□□□□ 0.82
CLTAP09496 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CLTAP09496 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.17■□□□□ 0.82
CLTAP09496 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLTAP09496 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.17■□□□□ 0.82
CLTAP09496 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLTAP09496 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.17■□□□□ 0.82
CLTAP09496 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.16■□□□□ 0.82
CLTAP09496 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CLTAP09496 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 AL031133.1-201ENST00000406807 723 ntBASIC20.16■□□□□ 0.82
CLTAP09496 AL671277.2-201ENST00000458060 996 ntBASIC20.16■□□□□ 0.82
CLTAP09496 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.16■□□□□ 0.82
CLTAP09496 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.16■□□□□ 0.82
CLTAP09496 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
CLTAP09496 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLTAP09496 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLTAP09496 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.15■□□□□ 0.82
CLTAP09496 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
CLTAP09496 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLTAP09496 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
CLTAP09496 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.15■□□□□ 0.82
CLTAP09496 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CLTAP09496 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CLTAP09496 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLTAP09496 AP000593.1-201ENST00000393668 712 ntBASIC20.15■□□□□ 0.82
CLTAP09496 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLTAP09496 AC112907.2-201ENST00000448639 330 ntBASIC20.15■□□□□ 0.82
CLTAP09496 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.15■□□□□ 0.82
CLTAP09496 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.15■□□□□ 0.82
CLTAP09496 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLTAP09496 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
CLTAP09496 HYMAI.1-201ENST00000620949 238 ntBASIC20.15■□□□□ 0.82
CLTAP09496 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.15■□□□□ 0.82
CLTAP09496 AL157888.1-201ENST00000631930 593 ntBASIC20.15■□□□□ 0.82
CLTAP09496 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLTAP09496 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLTAP09496 KRT8P50-201ENST00000562022 1438 ntBASIC20.15■□□□□ 0.82
CLTAP09496 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
CLTAP09496 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.15■□□□□ 0.82
CLTAP09496 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.15■□□□□ 0.82
CLTAP09496 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLTAP09496 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.15■□□□□ 0.82
CLTAP09496 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.15■□□□□ 0.82
CLTAP09496 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.15■□□□□ 0.82
CLTAP09496 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLTAP09496 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLTAP09496 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLTAP09496 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CLTAP09496 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CLTAP09496 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLTAP09496 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLTAP09496 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLTAP09496 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CLTAP09496 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLTAP09496 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLTAP09496 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLTAP09496 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLTAP09496 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CLTAP09496 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.14■□□□□ 0.81
CLTAP09496 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLTAP09496 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CLTAP09496 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.14■□□□□ 0.81
CLTAP09496 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLTAP09496 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLTAP09496 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLTAP09496 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLTAP09496 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CLTAP09496 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLTAP09496 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.13■□□□□ 0.81
CLTAP09496 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLTAP09496 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLTAP09496 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms