Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HMGN1P05114 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.74■□□□□ 0.27
HMGN1P05114 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HMGN1P05114 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGN1P05114 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGN1P05114 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HMGN1P05114 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.73■□□□□ 0.27
HMGN1P05114 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HMGN1P05114 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.73■□□□□ 0.27
HMGN1P05114 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HMGN1P05114 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGN1P05114 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HMGN1P05114 AC134043.2-201ENST00000624206 2238 ntBASIC16.73■□□□□ 0.27
HMGN1P05114 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGN1P05114 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGN1P05114 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGN1P05114 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.73■□□□□ 0.27
HMGN1P05114 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.73■□□□□ 0.27
HMGN1P05114 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.73■□□□□ 0.27
HMGN1P05114 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 FLJ13224-201ENST00000313737 1514 ntBASIC16.73■□□□□ 0.27
HMGN1P05114 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
HMGN1P05114 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HMGN1P05114 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGN1P05114 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGN1P05114 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HMGN1P05114 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.72■□□□□ 0.27
HMGN1P05114 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGN1P05114 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGN1P05114 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HMGN1P05114 AP000593.1-201ENST00000393668 712 ntBASIC16.72■□□□□ 0.27
HMGN1P05114 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.72■□□□□ 0.27
HMGN1P05114 KSR1P1-201ENST00000446298 240 ntBASIC16.72■□□□□ 0.27
HMGN1P05114 AP002982.1-201ENST00000492365 877 ntBASIC16.72■□□□□ 0.27
HMGN1P05114 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.72■□□□□ 0.27
HMGN1P05114 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
HMGN1P05114 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.72■□□□□ 0.27
HMGN1P05114 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 AC110285.5-201ENST00000611501 352 ntBASIC16.72■□□□□ 0.27
HMGN1P05114 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.72■□□□□ 0.27
HMGN1P05114 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
HMGN1P05114 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HMGN1P05114 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HMGN1P05114 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 AL109659.2-201ENST00000606809 1674 ntBASIC16.72■□□□□ 0.27
HMGN1P05114 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGN1P05114 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGN1P05114 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HMGN1P05114 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.71■□□□□ 0.27
HMGN1P05114 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.71■□□□□ 0.27
HMGN1P05114 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGN1P05114 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGN1P05114 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.71■□□□□ 0.27
HMGN1P05114 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGN1P05114 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGN1P05114 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMGN1P05114 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGN1P05114 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGN1P05114 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGN1P05114 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
HMGN1P05114 AC133681.1-201ENST00000465482 601 ntBASIC16.71■□□□□ 0.27
HMGN1P05114 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGN1P05114 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.71■□□□□ 0.27
HMGN1P05114 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
HMGN1P05114 REXO1L9P-201ENST00000604264 2108 ntBASIC16.71■□□□□ 0.27
HMGN1P05114 AL353708.3-201ENST00000610272 989 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms