Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.16■□□□□ 0.18
LCATP04180 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.16■□□□□ 0.18
LCATP04180 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.16■□□□□ 0.18
LCATP04180 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.16■□□□□ 0.18
LCATP04180 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.16■□□□□ 0.18
LCATP04180 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.16■□□□□ 0.18
LCATP04180 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.16■□□□□ 0.18
LCATP04180 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.16■□□□□ 0.18
LCATP04180 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.16■□□□□ 0.18
LCATP04180 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.16■□□□□ 0.18
LCATP04180 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.16■□□□□ 0.18
LCATP04180 KRT8P45-201ENST00000414328 1447 ntBASIC16.16■□□□□ 0.18
LCATP04180 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LCATP04180 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.16■□□□□ 0.18
LCATP04180 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.16■□□□□ 0.18
LCATP04180 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LCATP04180 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LCATP04180 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.15■□□□□ 0.18
LCATP04180 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCATP04180 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.15■□□□□ 0.18
LCATP04180 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCATP04180 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCATP04180 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCATP04180 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCATP04180 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCATP04180 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LCATP04180 AC093827.2-201ENST00000512654 315 ntBASIC16.15■□□□□ 0.18
LCATP04180 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.15■□□□□ 0.18
LCATP04180 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.15■□□□□ 0.18
LCATP04180 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.15■□□□□ 0.18
LCATP04180 AL353719.1-201ENST00000566847 864 ntBASIC16.15■□□□□ 0.18
LCATP04180 MIR3180-5-201ENST00000583743 153 ntBASIC16.15■□□□□ 0.18
LCATP04180 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LCATP04180 AC116562.4-202ENST00000641738 218 ntBASIC16.15■□□□□ 0.18
LCATP04180 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCATP04180 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCATP04180 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LCATP04180 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.15■□□□□ 0.18
LCATP04180 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCATP04180 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCATP04180 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCATP04180 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.15■□□□□ 0.18
LCATP04180 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.15■□□□□ 0.18
LCATP04180 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCATP04180 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCATP04180 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCATP04180 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCATP04180 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.14■□□□□ 0.17
LCATP04180 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.14■□□□□ 0.17
LCATP04180 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LCATP04180 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.14■□□□□ 0.17
LCATP04180 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LCATP04180 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.14■□□□□ 0.17
LCATP04180 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.14■□□□□ 0.17
LCATP04180 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LCATP04180 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.14■□□□□ 0.17
LCATP04180 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.14■□□□□ 0.17
LCATP04180 AP003041.3-201ENST00000527151 707 ntBASIC16.14■□□□□ 0.17
LCATP04180 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.14■□□□□ 0.17
LCATP04180 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.14■□□□□ 0.17
LCATP04180 AL023803.3-201ENST00000615559 522 ntBASIC16.14■□□□□ 0.17
LCATP04180 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.14■□□□□ 0.17
LCATP04180 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.14■□□□□ 0.17
LCATP04180 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCATP04180 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCATP04180 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCATP04180 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.14■□□□□ 0.17
LCATP04180 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCATP04180 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCATP04180 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.14■□□□□ 0.17
LCATP04180 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.14■□□□□ 0.17
LCATP04180 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCATP04180 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCATP04180 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCATP04180 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LCATP04180 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.13■□□□□ 0.17
LCATP04180 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCATP04180 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.13■□□□□ 0.17
LCATP04180 MYLKP1-201ENST00000509077 1580 ntBASIC16.13■□□□□ 0.17
LCATP04180 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
LCATP04180 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCATP04180 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCATP04180 AC034236.2-201ENST00000606662 1610 ntBASIC16.13■□□□□ 0.17
LCATP04180 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCATP04180 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LCATP04180 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCATP04180 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms