Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VTNP04004 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.19■□□□□ 0.82
VTNP04004 TPM4P1-201ENST00000436100 807 ntBASIC20.19■□□□□ 0.82
VTNP04004 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.19■□□□□ 0.82
VTNP04004 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
VTNP04004 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
VTNP04004 AC004263.2-201ENST00000617183 678 ntBASIC20.19■□□□□ 0.82
VTNP04004 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VTNP04004 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VTNP04004 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.19■□□□□ 0.82
VTNP04004 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VTNP04004 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VTNP04004 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.19■□□□□ 0.82
VTNP04004 SDHAP2-201ENST00000455183 2001 ntBASIC20.19■□□□□ 0.82
VTNP04004 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VTNP04004 LINC00167-201ENST00000530583 1419 ntBASIC20.19■□□□□ 0.82
VTNP04004 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VTNP04004 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
VTNP04004 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.18■□□□□ 0.82
VTNP04004 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
VTNP04004 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.18■□□□□ 0.82
VTNP04004 NUS1P1-201ENST00000446295 882 ntBASIC20.18■□□□□ 0.82
VTNP04004 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 AC012615.1-201ENST00000565797 1299 ntBASIC20.18■□□□□ 0.82
VTNP04004 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.18■□□□□ 0.82
VTNP04004 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
VTNP04004 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.18■□□□□ 0.82
VTNP04004 AL732292.2-201ENST00000609649 430 ntBASIC20.18■□□□□ 0.82
VTNP04004 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
VTNP04004 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.18■□□□□ 0.82
VTNP04004 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.18■□□□□ 0.82
VTNP04004 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
VTNP04004 AC233702.3-201ENST00000578656 1387 ntBASIC20.18■□□□□ 0.82
VTNP04004 AC112777.1-201ENST00000540175 1423 ntBASIC20.18■□□□□ 0.82
VTNP04004 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VTNP04004 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
VTNP04004 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VTNP04004 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VTNP04004 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.17■□□□□ 0.82
VTNP04004 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.17■□□□□ 0.82
VTNP04004 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
VTNP04004 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.17■□□□□ 0.82
VTNP04004 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.17■□□□□ 0.82
VTNP04004 AC026396.1-201ENST00000419388 421 ntBASIC20.17■□□□□ 0.82
VTNP04004 RN7SL606P-201ENST00000472779 293 ntBASIC20.17■□□□□ 0.82
VTNP04004 FOSL1P1-201ENST00000511041 816 ntBASIC20.17■□□□□ 0.82
VTNP04004 GUSBP12-201ENST00000513727 720 ntBASIC20.17■□□□□ 0.82
VTNP04004 AC074051.2-201ENST00000565115 352 ntBASIC20.17■□□□□ 0.82
VTNP04004 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.17■□□□□ 0.82
VTNP04004 RN7SL510P-201ENST00000581311 263 ntBASIC20.17■□□□□ 0.82
VTNP04004 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.17■□□□□ 0.82
VTNP04004 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
VTNP04004 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
VTNP04004 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
VTNP04004 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VTNP04004 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VTNP04004 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VTNP04004 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VTNP04004 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.16■□□□□ 0.82
VTNP04004 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
VTNP04004 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VTNP04004 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VTNP04004 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VTNP04004 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VTNP04004 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VTNP04004 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
VTNP04004 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.16■□□□□ 0.82
VTNP04004 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VTNP04004 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.16■□□□□ 0.82
VTNP04004 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VTNP04004 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.16■□□□□ 0.82
VTNP04004 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.16■□□□□ 0.82
VTNP04004 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.16■□□□□ 0.82
VTNP04004 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VTNP04004 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
VTNP04004 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VTNP04004 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VTNP04004 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
VTNP04004 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.16■□□□□ 0.82
VTNP04004 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VTNP04004 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.16■□□□□ 0.82
VTNP04004 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VTNP04004 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.15■□□□□ 0.82
VTNP04004 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms