Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A1P00352 TCF3P1-201ENST00000423021 1937 ntBASIC20.99■□□□□ 0.95
ALDH1A1P00352 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A1P00352 AP002414.3-201ENST00000589352 1468 ntBASIC20.99■□□□□ 0.95
ALDH1A1P00352 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A1P00352 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALDH1A1P00352 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.99■□□□□ 0.95
ALDH1A1P00352 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A1P00352 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.98■□□□□ 0.95
ALDH1A1P00352 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.98■□□□□ 0.95
ALDH1A1P00352 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ALDH1A1P00352 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A1P00352 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A1P00352 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ALDH1A1P00352 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A1P00352 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.98■□□□□ 0.95
ALDH1A1P00352 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.98■□□□□ 0.95
ALDH1A1P00352 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.98■□□□□ 0.95
ALDH1A1P00352 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
ALDH1A1P00352 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
ALDH1A1P00352 NKAPP1-205ENST00000585790 367 ntBASIC20.98■□□□□ 0.95
ALDH1A1P00352 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.98■□□□□ 0.95
ALDH1A1P00352 PGM5P2-202ENST00000637225 1043 ntBASIC20.98■□□□□ 0.95
ALDH1A1P00352 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A1P00352 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A1P00352 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.98■□□□□ 0.95
ALDH1A1P00352 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A1P00352 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALDH1A1P00352 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ALDH1A1P00352 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.97■□□□□ 0.95
ALDH1A1P00352 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.97■□□□□ 0.95
ALDH1A1P00352 AC254562.1-201ENST00000417586 456 ntBASIC20.97■□□□□ 0.95
ALDH1A1P00352 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.97■□□□□ 0.95
ALDH1A1P00352 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
ALDH1A1P00352 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.97■□□□□ 0.95
ALDH1A1P00352 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.97■□□□□ 0.95
ALDH1A1P00352 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ALDH1A1P00352 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ALDH1A1P00352 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
ALDH1A1P00352 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.97■□□□□ 0.95
ALDH1A1P00352 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALDH1A1P00352 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.96■□□□□ 0.95
ALDH1A1P00352 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A1P00352 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A1P00352 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.96■□□□□ 0.95
ALDH1A1P00352 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A1P00352 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A1P00352 MIR149-201ENST00000384879 89 ntBASIC20.96■□□□□ 0.95
ALDH1A1P00352 FAM8A3P-201ENST00000427218 844 ntBASIC20.96■□□□□ 0.95
ALDH1A1P00352 YBX1P5-201ENST00000509441 847 ntBASIC20.96■□□□□ 0.95
ALDH1A1P00352 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.96■□□□□ 0.95
ALDH1A1P00352 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.96■□□□□ 0.95
ALDH1A1P00352 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A1P00352 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.96■□□□□ 0.95
ALDH1A1P00352 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A1P00352 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALDH1A1P00352 AIRN-201ENST00000601203 4374 ntBASIC20.96■□□□□ 0.95
ALDH1A1P00352 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.96■□□□□ 0.95
ALDH1A1P00352 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.96■□□□□ 0.95
ALDH1A1P00352 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ALDH1A1P00352 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
ALDH1A1P00352 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.95■□□□□ 0.94
ALDH1A1P00352 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A1P00352 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A1P00352 IRX1P1-201ENST00000438849 1838 ntBASIC20.95■□□□□ 0.94
ALDH1A1P00352 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A1P00352 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A1P00352 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A1P00352 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ALDH1A1P00352 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.95■□□□□ 0.94
ALDH1A1P00352 AL645939.2-201ENST00000427340 991 ntBASIC20.95■□□□□ 0.94
ALDH1A1P00352 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALDH1A1P00352 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.95■□□□□ 0.94
ALDH1A1P00352 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.95■□□□□ 0.94
ALDH1A1P00352 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.95■□□□□ 0.94
ALDH1A1P00352 AC064836.3-201ENST00000607928 673 ntBASIC20.95■□□□□ 0.94
ALDH1A1P00352 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.95■□□□□ 0.94
ALDH1A1P00352 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.95■□□□□ 0.94
ALDH1A1P00352 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms