Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.13■□□□□ 0.01
SCAF4O95104 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCAF4O95104 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SCAF4O95104 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
SCAF4O95104 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.12■□□□□ 0.01
SCAF4O95104 AL356309.3-201ENST00000624132 1934 ntBASIC15.12■□□□□ 0.01
SCAF4O95104 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.12■□□□□ 0.01
SCAF4O95104 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.12■□□□□ 0.01
SCAF4O95104 TSPY20P-201ENST00000450910 630 ntBASIC15.12■□□□□ 0.01
SCAF4O95104 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.12■□□□□ 0.01
SCAF4O95104 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.12■□□□□ 0.01
SCAF4O95104 SOX15-203ENST00000570788 1093 ntBASIC15.12■□□□□ 0.01
SCAF4O95104 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.12■□□□□ 0.01
SCAF4O95104 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.12■□□□□ 0.01
SCAF4O95104 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SCAF4O95104 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.12■□□□□ 0.01
SCAF4O95104 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.12■□□□□ 0.01
SCAF4O95104 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SCAF4O95104 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.11■□□□□ 0.01
SCAF4O95104 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SCAF4O95104 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.11■□□□□ 0.01
SCAF4O95104 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
SCAF4O95104 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SCAF4O95104 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.11■□□□□ 0.01
SCAF4O95104 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.11■□□□□ 0.01
SCAF4O95104 FAM201B-201ENST00000458407 597 ntBASIC15.11■□□□□ 0.01
SCAF4O95104 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SCAF4O95104 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.11■□□□□ 0.01
SCAF4O95104 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.11■□□□□ 0.01
SCAF4O95104 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SCAF4O95104 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.11■□□□□ 0.01
SCAF4O95104 GNAS-203ENST00000306120 1878 ntBASIC15.11■□□□□ 0.01
SCAF4O95104 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 AC126763.1-201ENST00000552015 2118 ntBASIC15.11■□□□□ 0.01
SCAF4O95104 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SCAF4O95104 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SCAF4O95104 PCDHA12-202ENST00000613593 2588 ntBASIC15.11■□□□□ 0.01
SCAF4O95104 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SCAF4O95104 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.1■□□□□ 0.01
SCAF4O95104 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.1■□□□□ 0.01
SCAF4O95104 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SCAF4O95104 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.1■□□□□ 0.01
SCAF4O95104 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 AC141586.5-201ENST00000624546 2050 ntBASIC15.1■□□□□ 0.01
SCAF4O95104 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.1■□□□□ 0.01
SCAF4O95104 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SCAF4O95104 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms