Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LTN1O94822 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC24.4■■□□□ 1.5
LTN1O94822 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC24.4■■□□□ 1.5
LTN1O94822 AL591684.3-201ENST00000605187 298 ntBASIC24.4■■□□□ 1.5
LTN1O94822 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
LTN1O94822 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LTN1O94822 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LTN1O94822 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LTN1O94822 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LTN1O94822 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC24.4■■□□□ 1.5
LTN1O94822 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC24.39■■□□□ 1.5
LTN1O94822 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC24.39■■□□□ 1.5
LTN1O94822 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
LTN1O94822 AC073648.2-201ENST00000510116 352 ntBASIC24.39■■□□□ 1.5
LTN1O94822 IGHV3-22-201ENST00000520721 359 ntBASIC24.39■■□□□ 1.5
LTN1O94822 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC24.39■■□□□ 1.5
LTN1O94822 IRF8-202ENST00000562492 946 ntTSL 3 BASIC24.39■■□□□ 1.5
LTN1O94822 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
LTN1O94822 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
LTN1O94822 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
LTN1O94822 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC24.39■■□□□ 1.5
LTN1O94822 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC24.39■■□□□ 1.5
LTN1O94822 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
LTN1O94822 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
LTN1O94822 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC24.39■■□□□ 1.49
LTN1O94822 RBM17P3-201ENST00000417687 1192 ntBASIC24.39■■□□□ 1.49
LTN1O94822 HNRNPDP1-201ENST00000439535 754 ntBASIC24.39■■□□□ 1.49
LTN1O94822 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC24.39■■□□□ 1.49
LTN1O94822 SCARNA2-201ENST00000458748 420 ntBASIC24.39■■□□□ 1.49
LTN1O94822 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC24.39■■□□□ 1.49
LTN1O94822 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC24.39■■□□□ 1.49
LTN1O94822 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC24.39■■□□□ 1.49
LTN1O94822 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
LTN1O94822 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
LTN1O94822 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTN1O94822 INTS4P1-201ENST00000438455 1935 ntBASIC24.38■■□□□ 1.49
LTN1O94822 MYLKP1-201ENST00000509077 1580 ntBASIC24.38■■□□□ 1.49
LTN1O94822 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTN1O94822 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTN1O94822 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LTN1O94822 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LTN1O94822 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTN1O94822 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
LTN1O94822 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTN1O94822 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC24.38■■□□□ 1.49
LTN1O94822 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTN1O94822 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTN1O94822 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC24.38■■□□□ 1.49
LTN1O94822 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC24.38■■□□□ 1.49
LTN1O94822 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTN1O94822 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LTN1O94822 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC24.38■■□□□ 1.49
LTN1O94822 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
LTN1O94822 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
LTN1O94822 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
LTN1O94822 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC24.37■■□□□ 1.49
LTN1O94822 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.37■■□□□ 1.49
LTN1O94822 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LTN1O94822 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
LTN1O94822 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC24.37■■□□□ 1.49
LTN1O94822 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC24.37■■□□□ 1.49
LTN1O94822 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
LTN1O94822 AC064862.7-201ENST00000604520 867 ntBASIC24.37■■□□□ 1.49
LTN1O94822 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LTN1O94822 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC24.37■■□□□ 1.49
LTN1O94822 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LTN1O94822 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LTN1O94822 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LTN1O94822 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LTN1O94822 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
LTN1O94822 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
LTN1O94822 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC24.37■■□□□ 1.49
LTN1O94822 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC24.37■■□□□ 1.49
LTN1O94822 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC24.37■■□□□ 1.49
LTN1O94822 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LTN1O94822 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC24.36■■□□□ 1.49
LTN1O94822 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LTN1O94822 TP73-AS1-210ENST00000637775 1455 ntBASIC24.36■■□□□ 1.49
LTN1O94822 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LTN1O94822 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LTN1O94822 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC24.36■■□□□ 1.49
LTN1O94822 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC24.36■■□□□ 1.49
LTN1O94822 SART3-203ENST00000546611 1184 ntBASIC24.36■■□□□ 1.49
LTN1O94822 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC24.36■■□□□ 1.49
LTN1O94822 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC24.35■■□□□ 1.49
LTN1O94822 LINC01126-201ENST00000623515 1646 ntBASIC24.35■■□□□ 1.49
LTN1O94822 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LTN1O94822 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LTN1O94822 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
LTN1O94822 PAN3-AS1-201ENST00000563843 1351 ntBASIC24.35■■□□□ 1.49
LTN1O94822 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC24.35■■□□□ 1.49
LTN1O94822 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
LTN1O94822 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC24.35■■□□□ 1.49
LTN1O94822 POLD2P1-201ENST00000511220 997 ntBASIC24.35■■□□□ 1.49
LTN1O94822 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC24.35■■□□□ 1.49
LTN1O94822 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC24.35■■□□□ 1.49
LTN1O94822 COBL-210ENST00000632460 1941 ntTSL 5 BASIC24.35■■□□□ 1.49
LTN1O94822 ANO7L1-203ENST00000602586 1720 ntBASIC24.35■■□□□ 1.49
LTN1O94822 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC24.35■■□□□ 1.49
LTN1O94822 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms