Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE3O75131 AC090340.1-201ENST00000620778 4980 ntBASIC17.7■□□□□ 0.42
CPNE3O75131 AC141586.3-201ENST00000562166 1838 ntBASIC17.7■□□□□ 0.42
CPNE3O75131 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CPNE3O75131 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.7■□□□□ 0.42
CPNE3O75131 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE3O75131 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE3O75131 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CPNE3O75131 FP475955.4-201ENST00000623131 1990 ntBASIC17.7■□□□□ 0.42
CPNE3O75131 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE3O75131 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE3O75131 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE3O75131 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE3O75131 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
CPNE3O75131 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE3O75131 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE3O75131 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE3O75131 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPNE3O75131 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.7■□□□□ 0.42
CPNE3O75131 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.7■□□□□ 0.42
CPNE3O75131 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPNE3O75131 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE3O75131 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE3O75131 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPNE3O75131 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.7■□□□□ 0.42
CPNE3O75131 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CPNE3O75131 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE3O75131 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE3O75131 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE3O75131 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE3O75131 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CPNE3O75131 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CPNE3O75131 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE3O75131 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CPNE3O75131 AC093484.2-201ENST00000580996 2166 ntBASIC17.69■□□□□ 0.42
CPNE3O75131 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE3O75131 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE3O75131 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE3O75131 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.69■□□□□ 0.42
CPNE3O75131 KRT18P23-201ENST00000435622 1283 ntBASIC17.69■□□□□ 0.42
CPNE3O75131 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE3O75131 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE3O75131 MIR3917-201ENST00000580971 93 ntBASIC17.69■□□□□ 0.42
CPNE3O75131 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE3O75131 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE3O75131 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE3O75131 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE3O75131 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE3O75131 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE3O75131 AC005332.7-201ENST00000614046 2005 ntBASIC17.69■□□□□ 0.42
CPNE3O75131 KRT8P32-201ENST00000512863 1461 ntBASIC17.69■□□□□ 0.42
CPNE3O75131 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE3O75131 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CPNE3O75131 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CPNE3O75131 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CPNE3O75131 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE3O75131 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.68■□□□□ 0.42
CPNE3O75131 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.68■□□□□ 0.42
CPNE3O75131 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE3O75131 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE3O75131 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CPNE3O75131 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CPNE3O75131 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE3O75131 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 HOXB1-202ENST00000577092 1414 ntBASIC17.68■□□□□ 0.42
CPNE3O75131 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE3O75131 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE3O75131 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE3O75131 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CPNE3O75131 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE3O75131 KRT18P48-201ENST00000434763 852 ntBASIC17.67■□□□□ 0.42
CPNE3O75131 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE3O75131 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms