Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.67■□□□□ 0.42
DUX1O43812 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.67■□□□□ 0.42
DUX1O43812 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DUX1O43812 AC116562.4-201ENST00000641316 2276 ntBASIC17.67■□□□□ 0.42
DUX1O43812 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 AC004870.1-201ENST00000315132 882 ntBASIC17.66■□□□□ 0.42
DUX1O43812 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.66■□□□□ 0.42
DUX1O43812 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
DUX1O43812 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.66■□□□□ 0.42
DUX1O43812 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.66■□□□□ 0.42
DUX1O43812 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.66■□□□□ 0.42
DUX1O43812 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.66■□□□□ 0.42
DUX1O43812 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.66■□□□□ 0.42
DUX1O43812 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.66■□□□□ 0.42
DUX1O43812 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
DUX1O43812 AC124864.1-201ENST00000623408 392 ntBASIC17.66■□□□□ 0.42
DUX1O43812 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 AC120498.9-201ENST00000339021 3867 ntBASIC17.66■□□□□ 0.42
DUX1O43812 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.66■□□□□ 0.42
DUX1O43812 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DUX1O43812 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
DUX1O43812 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.66■□□□□ 0.42
DUX1O43812 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
DUX1O43812 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DUX1O43812 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.65■□□□□ 0.42
DUX1O43812 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.65■□□□□ 0.42
DUX1O43812 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.65■□□□□ 0.42
DUX1O43812 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.65■□□□□ 0.42
DUX1O43812 AC074051.2-201ENST00000565115 352 ntBASIC17.65■□□□□ 0.42
DUX1O43812 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.65■□□□□ 0.42
DUX1O43812 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.65■□□□□ 0.42
DUX1O43812 RN7SL510P-201ENST00000581311 263 ntBASIC17.65■□□□□ 0.42
DUX1O43812 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
DUX1O43812 LINC01711-201ENST00000598340 967 ntBASIC17.65■□□□□ 0.42
DUX1O43812 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.65■□□□□ 0.42
DUX1O43812 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
DUX1O43812 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
DUX1O43812 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 AC233702.3-201ENST00000578656 1387 ntBASIC17.65■□□□□ 0.42
DUX1O43812 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
DUX1O43812 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX1O43812 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.64■□□□□ 0.42
DUX1O43812 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.64■□□□□ 0.42
DUX1O43812 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
DUX1O43812 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
DUX1O43812 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
DUX1O43812 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX1O43812 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DUX1O43812 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX1O43812 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
DUX1O43812 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
DUX1O43812 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX1O43812 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX1O43812 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX1O43812 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX1O43812 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.64■□□□□ 0.41
DUX1O43812 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DUX1O43812 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.64■□□□□ 0.41
DUX1O43812 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.64■□□□□ 0.41
DUX1O43812 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX1O43812 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.64■□□□□ 0.41
DUX1O43812 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.64■□□□□ 0.41
DUX1O43812 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.64■□□□□ 0.41
DUX1O43812 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.64■□□□□ 0.41
DUX1O43812 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.64■□□□□ 0.41
DUX1O43812 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX1O43812 MYLKP1-201ENST00000509077 1580 ntBASIC17.64■□□□□ 0.41
DUX1O43812 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.64■□□□□ 0.41
DUX1O43812 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
DUX1O43812 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.64■□□□□ 0.41
DUX1O43812 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX1O43812 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms