Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA2O43364 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA2O43364 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA2O43364 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXA2O43364 AP000347.1-202ENST00000435868 847 ntBASIC19.71■□□□□ 0.75
HOXA2O43364 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.71■□□□□ 0.75
HOXA2O43364 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXA2O43364 BNIP3P18-201ENST00000593976 575 ntBASIC19.71■□□□□ 0.75
HOXA2O43364 AC114341.1-201ENST00000618070 349 ntBASIC19.71■□□□□ 0.75
HOXA2O43364 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA2O43364 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA2O43364 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA2O43364 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA2O43364 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXA2O43364 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.7■□□□□ 0.74
HOXA2O43364 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HOXA2O43364 AL161938.1-201ENST00000569833 2180 ntBASIC19.7■□□□□ 0.74
HOXA2O43364 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.7■□□□□ 0.74
HOXA2O43364 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.7■□□□□ 0.74
HOXA2O43364 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.7■□□□□ 0.74
HOXA2O43364 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HOXA2O43364 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.7■□□□□ 0.74
HOXA2O43364 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.7■□□□□ 0.74
HOXA2O43364 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXA2O43364 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXA2O43364 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXA2O43364 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
HOXA2O43364 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA2O43364 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXA2O43364 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA2O43364 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA2O43364 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HOXA2O43364 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA2O43364 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA2O43364 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA2O43364 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HOXA2O43364 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA2O43364 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.69■□□□□ 0.74
HOXA2O43364 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA2O43364 MRPL3P1-201ENST00000400109 1033 ntBASIC19.69■□□□□ 0.74
HOXA2O43364 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.69■□□□□ 0.74
HOXA2O43364 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA2O43364 AC096582.2-201ENST00000510860 516 ntBASIC19.69■□□□□ 0.74
HOXA2O43364 AC079776.4-201ENST00000511039 504 ntBASIC19.69■□□□□ 0.74
HOXA2O43364 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HOXA2O43364 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.69■□□□□ 0.74
HOXA2O43364 MIR5100-201ENST00000579544 119 ntBASIC19.69■□□□□ 0.74
HOXA2O43364 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HOXA2O43364 MYLKP1-201ENST00000509077 1580 ntBASIC19.69■□□□□ 0.74
HOXA2O43364 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HOXA2O43364 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA2O43364 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA2O43364 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA2O43364 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA2O43364 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA2O43364 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA2O43364 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HOXA2O43364 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HOXA2O43364 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HOXA2O43364 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXA2O43364 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HOXA2O43364 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA2O43364 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA2O43364 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA2O43364 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXA2O43364 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA2O43364 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA2O43364 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.68■□□□□ 0.74
HOXA2O43364 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.68■□□□□ 0.74
HOXA2O43364 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA2O43364 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXA2O43364 AF238378.1-201ENST00000526806 358 ntBASIC19.68■□□□□ 0.74
HOXA2O43364 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
HOXA2O43364 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXA2O43364 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.68■□□□□ 0.74
HOXA2O43364 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA2O43364 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
HOXA2O43364 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA2O43364 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA2O43364 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA2O43364 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA2O43364 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA2O43364 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms