Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.06■□□□□ 0.48
TAF4O00268 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TAF4O00268 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TAF4O00268 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.06■□□□□ 0.48
TAF4O00268 CHCHD2P8-201ENST00000429873 447 ntBASIC18.06■□□□□ 0.48
TAF4O00268 KRT16P4-201ENST00000453883 522 ntBASIC18.06■□□□□ 0.48
TAF4O00268 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.06■□□□□ 0.48
TAF4O00268 AP000867.3-201ENST00000524675 377 ntBASIC18.06■□□□□ 0.48
TAF4O00268 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TAF4O00268 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.06■□□□□ 0.48
TAF4O00268 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.06■□□□□ 0.48
TAF4O00268 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TAF4O00268 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TAF4O00268 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TAF4O00268 AC020916.1-201ENST00000587762 1774 ntBASIC18.06■□□□□ 0.48
TAF4O00268 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TAF4O00268 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TAF4O00268 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TAF4O00268 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.05■□□□□ 0.48
TAF4O00268 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.05■□□□□ 0.48
TAF4O00268 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TAF4O00268 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.05■□□□□ 0.48
TAF4O00268 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.05■□□□□ 0.48
TAF4O00268 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.05■□□□□ 0.48
TAF4O00268 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.05■□□□□ 0.48
TAF4O00268 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.05■□□□□ 0.48
TAF4O00268 TPSP2-201ENST00000561760 610 ntBASIC18.05■□□□□ 0.48
TAF4O00268 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TAF4O00268 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TAF4O00268 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TAF4O00268 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.05■□□□□ 0.48
TAF4O00268 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TAF4O00268 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TAF4O00268 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.04■□□□□ 0.48
TAF4O00268 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TAF4O00268 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TAF4O00268 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TAF4O00268 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.04■□□□□ 0.48
TAF4O00268 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TAF4O00268 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.04■□□□□ 0.48
TAF4O00268 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TAF4O00268 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TAF4O00268 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TAF4O00268 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TAF4O00268 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TAF4O00268 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TAF4O00268 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TAF4O00268 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.04■□□□□ 0.48
TAF4O00268 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.04■□□□□ 0.48
TAF4O00268 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TAF4O00268 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
TAF4O00268 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TAF4O00268 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TAF4O00268 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.04■□□□□ 0.48
TAF4O00268 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TAF4O00268 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.03■□□□□ 0.48
TAF4O00268 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TAF4O00268 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TAF4O00268 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.03■□□□□ 0.48
TAF4O00268 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TAF4O00268 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.03■□□□□ 0.48
TAF4O00268 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TAF4O00268 IL9RP2-201ENST00000423948 1312 ntBASIC18.03■□□□□ 0.48
TAF4O00268 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TAF4O00268 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TAF4O00268 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TAF4O00268 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TAF4O00268 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.03■□□□□ 0.48
TAF4O00268 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.03■□□□□ 0.48
TAF4O00268 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.03■□□□□ 0.48
TAF4O00268 SLC25A1P1-201ENST00000528351 927 ntBASIC18.03■□□□□ 0.48
TAF4O00268 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TAF4O00268 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.03■□□□□ 0.48
TAF4O00268 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TAF4O00268 AL160286.2-201ENST00000567150 934 ntBASIC18.03■□□□□ 0.48
TAF4O00268 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TAF4O00268 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.03■□□□□ 0.48
TAF4O00268 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.03■□□□□ 0.48
TAF4O00268 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.03■□□□□ 0.48
TAF4O00268 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.03■□□□□ 0.48
TAF4O00268 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms