Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 AL645929.1-201ENST00000420084 975 ntBASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 KRT18P48-201ENST00000434763 852 ntBASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 SPDYE13P-201ENST00000445314 798 ntBASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 SEC1P-202ENST00000473944 940 ntBASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 AC083906.6-201ENST00000641366 219 ntBASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 AL109659.2-201ENST00000606809 1674 ntBASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA3F8WFD2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA3F8WFD2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 KRT18P23-201ENST00000435622 1283 ntBASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 AL157888.1-201ENST00000631930 593 ntBASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA3F8WFD2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPA3F8WFD2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms