Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 AC006333.2-201ENST00000607957 2099 ntBASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 AL645929.1-201ENST00000420084 975 ntBASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 KRT18P48-201ENST00000434763 852 ntBASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 SPDYE13P-201ENST00000445314 798 ntBASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 SEC1P-202ENST00000473944 940 ntBASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 AC083906.6-201ENST00000641366 219 ntBASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 AL109659.2-201ENST00000606809 1674 ntBASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPIPA2E9PIF3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPA2E9PIF3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 KRT18P23-201ENST00000435622 1283 ntBASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPA2E9PIF3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms