Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.04■□□□□ -0
LINC00473A8K010 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00473A8K010 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LINC00473A8K010 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.03■□□□□ -0
LINC00473A8K010 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.03■□□□□ -0
LINC00473A8K010 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.03■□□□□ -0
LINC00473A8K010 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LINC00473A8K010 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LINC00473A8K010 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 GCSHP5-201ENST00000443090 522 ntBASIC15.03■□□□□ -0
LINC00473A8K010 UBE2SP1-201ENST00000450587 669 ntBASIC15.03■□□□□ -0
LINC00473A8K010 CA15P1-201ENST00000481698 905 ntBASIC15.03■□□□□ -0
LINC00473A8K010 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.03■□□□□ -0
LINC00473A8K010 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.03■□□□□ -0
LINC00473A8K010 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.03■□□□□ -0
LINC00473A8K010 REXO1L10P-201ENST00000615707 1290 ntBASIC15.03■□□□□ -0
LINC00473A8K010 REXO1L12P-201ENST00000622156 912 ntBASIC15.03■□□□□ -0
LINC00473A8K010 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LINC00473A8K010 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LINC00473A8K010 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.03■□□□□ -0
LINC00473A8K010 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00473A8K010 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00473A8K010 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
LINC00473A8K010 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.02■□□□□ -0
LINC00473A8K010 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00473A8K010 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.02■□□□□ -0
LINC00473A8K010 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00473A8K010 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LINC00473A8K010 CRYGFP-201ENST00000418459 633 ntBASIC15.02■□□□□ -0
LINC00473A8K010 AC012618.2-201ENST00000428058 849 ntBASIC15.02■□□□□ -0
LINC00473A8K010 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.02■□□□□ -0
LINC00473A8K010 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.02■□□□□ -0
LINC00473A8K010 MIR4674-201ENST00000582457 87 ntBASIC15.02■□□□□ -0
LINC00473A8K010 AC233702.5-201ENST00000584107 538 ntBASIC15.02■□□□□ -0
LINC00473A8K010 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.02■□□□□ -0
LINC00473A8K010 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.02■□□□□ -0
LINC00473A8K010 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.02■□□□□ -0
LINC00473A8K010 AL049637.2-201ENST00000641778 930 ntBASIC15.02■□□□□ -0
LINC00473A8K010 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LINC00473A8K010 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00473A8K010 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00473A8K010 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00473A8K010 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00473A8K010 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00473A8K010 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
LINC00473A8K010 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00473A8K010 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00473A8K010 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00473A8K010 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00473A8K010 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LINC00473A8K010 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00473A8K010 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00473A8K010 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.02□□□□□ -0.01
LINC00473A8K010 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.02□□□□□ -0.01
LINC00473A8K010 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LINC00473A8K010 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.02□□□□□ -0.01
LINC00473A8K010 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00473A8K010 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LINC00473A8K010 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LINC00473A8K010 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00473A8K010 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LINC00473A8K010 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00473A8K010 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00473A8K010 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LINC00473A8K010 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC00473A8K010 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LINC00473A8K010 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LINC00473A8K010 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00473A8K010 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00473A8K010 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00473A8K010 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00473A8K010 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00473A8K010 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00473A8K010 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00473A8K010 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00473A8K010 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00473A8K010 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00473A8K010 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LINC00473A8K010 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.01□□□□□ -0.01
LINC00473A8K010 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00473A8K010 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.01□□□□□ -0.01
LINC00473A8K010 AP001412.1-201ENST00000608405 714 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms