Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 LAGE3P1-201ENST00000425356 484 ntBASIC17.57■□□□□ 0.4
CNOT1A5YKK6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT1A5YKK6 AC012645.4-201ENST00000610691 1061 ntBASIC17.57■□□□□ 0.4
CNOT1A5YKK6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 MIR4469-201ENST00000583919 79 ntBASIC17.56■□□□□ 0.4
CNOT1A5YKK6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CNOT1A5YKK6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 AC018845.2-201ENST00000568326 409 ntBASIC17.55■□□□□ 0.4
CNOT1A5YKK6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 AC107918.4-202ENST00000641623 219 ntBASIC17.55■□□□□ 0.4
CNOT1A5YKK6 AC092865.6-201ENST00000642101 219 ntBASIC17.55■□□□□ 0.4
CNOT1A5YKK6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 AL357033.4-201ENST00000617703 1807 ntBASIC17.55■□□□□ 0.4
CNOT1A5YKK6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 PRSS29P-201ENST00000440800 595 ntBASIC17.55■□□□□ 0.4
CNOT1A5YKK6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 AC113404.2-201ENST00000507884 177 ntBASIC17.55■□□□□ 0.4
CNOT1A5YKK6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.55■□□□□ 0.4
CNOT1A5YKK6 AC190387.1-201ENST00000551683 408 ntBASIC17.55■□□□□ 0.4
CNOT1A5YKK6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 AC138761.1-201ENST00000584393 385 ntBASIC17.55■□□□□ 0.4
CNOT1A5YKK6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT1A5YKK6 Z82202.1-201ENST00000623446 1880 ntBASIC17.54■□□□□ 0.4
CNOT1A5YKK6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 AC108751.1-201ENST00000490852 363 ntBASIC17.54■□□□□ 0.4
CNOT1A5YKK6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 C20orf181-201ENST00000623918 480 ntBASIC17.54■□□□□ 0.4
CNOT1A5YKK6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.54■□□□□ 0.4
CNOT1A5YKK6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms