Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 AC099343.3-201ENST00000605834 2503 ntBASIC16.1■□□□□ 0.17
SHISA3A0PJX4 RCC2P3-201ENST00000418112 1537 ntBASIC16.1■□□□□ 0.17
SHISA3A0PJX4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 CDCA4P2-201ENST00000441182 718 ntBASIC16.1■□□□□ 0.17
SHISA3A0PJX4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 SOX15-203ENST00000570788 1093 ntBASIC16.1■□□□□ 0.17
SHISA3A0PJX4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 LINC00602-201ENST00000629776 2065 ntBASIC16.1■□□□□ 0.17
SHISA3A0PJX4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHISA3A0PJX4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 KRT18P41-201ENST00000518924 1277 ntBASIC16.09■□□□□ 0.17
SHISA3A0PJX4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.09■□□□□ 0.17
SHISA3A0PJX4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHISA3A0PJX4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.08■□□□□ 0.17
SHISA3A0PJX4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SHISA3A0PJX4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHISA3A0PJX4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHISA3A0PJX4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHISA3A0PJX4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 AC080038.1-201ENST00000611274 1154 ntBASIC16.08■□□□□ 0.16
SHISA3A0PJX4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.08■□□□□ 0.16
SHISA3A0PJX4 AL023806.1-201ENST00000603994 1649 ntBASIC16.08■□□□□ 0.16
SHISA3A0PJX4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms