Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC092647.4-201ENST00000457211 535 ntBASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 COX11P1-201ENST00000489116 835 ntBASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 WWOX-216ENST00000569818 525 ntBASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 KRT8P11-201ENST00000409686 1436 ntBASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 RNF152P1-201ENST00000397754 604 ntBASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AL138966.2-201ENST00000621997 464 ntBASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC141257.4-201ENST00000634557 245 ntBASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC136944.6-201ENST00000634818 245 ntBASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.85□□□□□ -0.03
TCRBV4S1A1TA0A5B7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms