Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 DRAXINP1-201ENST00000437611 948 ntBASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 TPSP2-201ENST00000561760 610 ntBASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 IGHV3-41-201ENST00000613121 348 ntBASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 MIR3652-201ENST00000579335 131 ntBASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 AC004263.2-201ENST00000617183 678 ntBASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 AC012313.10-201ENST00000623509 926 ntBASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMIM28A0A1B0GU29 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.72■□□□□ 0.75
SMIM28A0A1B0GU29 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 RN7SL606P-201ENST00000472779 293 ntBASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMIM28A0A1B0GU29 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.74
SMIM28A0A1B0GU29 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms