Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV27A0A087WT01 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 RPS2P55-201ENST00000397318 883 ntBASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 GCSHP5-201ENST00000443090 522 ntBASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 AC107956.1-201ENST00000494359 873 ntBASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 KRT18P41-201ENST00000518924 1277 ntBASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 AC113410.3-201ENST00000623366 203 ntBASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV27A0A087WT01 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 ABHD17AP1-201ENST00000358206 933 ntBASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 MIR564-202ENST00000385049 94 ntBASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 REXO1L9P-201ENST00000604264 2108 ntBASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV27A0A087WT01 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 UBE2SP1-201ENST00000450587 669 ntBASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 REXO1L10P-201ENST00000615707 1290 ntBASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 REXO1L12P-201ENST00000622156 912 ntBASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV27A0A087WT01 AC008764.6-201ENST00000595909 2069 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms