Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 RNF152P1-201ENST00000397754 604 ntBASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RAI2Q9Y5P3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 TSPY5P-201ENST00000426936 936 ntBASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 AC010240.3-201ENST00000607688 395 ntBASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 AP000550.4-202ENST00000639755 178 ntBASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAI2Q9Y5P3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 AL163051.1-201ENST00000569214 1512 ntBASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 AL450487.1-201ENST00000426799 995 ntBASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 AC005082.1-201ENST00000413042 2259 ntBASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RAI2Q9Y5P3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.65■□□□□ 0.58
RAI2Q9Y5P3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAI2Q9Y5P3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.65■□□□□ 0.58
RAI2Q9Y5P3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAI2Q9Y5P3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RAI2Q9Y5P3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAI2Q9Y5P3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAI2Q9Y5P3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAI2Q9Y5P3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.65■□□□□ 0.58
RAI2Q9Y5P3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAI2Q9Y5P3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms