Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB2Q9Y5E7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB2Q9Y5E7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB2Q9Y5E7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB2Q9Y5E7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHB2Q9Y5E7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PCDHB2Q9Y5E7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB2Q9Y5E7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB2Q9Y5E7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 TSSC2-201ENST00000450217 709 ntBASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 BX276092.5-203ENST00000456199 560 ntBASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 CLEC4GP1-201ENST00000596555 870 ntBASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 AL121672.3-201ENST00000608644 468 ntBASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 AC092119.3-201ENST00000612618 583 ntBASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 HEIH-201ENST00000623091 1652 ntBASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 AC016734.2-201ENST00000624325 1377 ntBASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB2Q9Y5E7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 MIR3180-4-201ENST00000582223 153 ntBASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB2Q9Y5E7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 AL357033.4-201ENST00000617703 1807 ntBASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB2Q9Y5E7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB2Q9Y5E7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
PCDHB2Q9Y5E7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB2Q9Y5E7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB2Q9Y5E7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB2Q9Y5E7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB2Q9Y5E7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB2Q9Y5E7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB2Q9Y5E7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB2Q9Y5E7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PCDHB2Q9Y5E7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB2Q9Y5E7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB2Q9Y5E7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms